Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TRA2BP62995 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
TRA2BP62995 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
TRA2BP62995 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRA2BP62995 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.25□□□□□ -0.13
TRA2BP62995 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRA2BP62995 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.25□□□□□ -0.13
TRA2BP62995 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRA2BP62995 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
TRA2BP62995 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRA2BP62995 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.25□□□□□ -0.13
TRA2BP62995 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.25□□□□□ -0.13
TRA2BP62995 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRA2BP62995 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.25□□□□□ -0.13
TRA2BP62995 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRA2BP62995 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRA2BP62995 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRA2BP62995 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TRA2BP62995 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRA2BP62995 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRA2BP62995 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRA2BP62995 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.24□□□□□ -0.13
TRA2BP62995 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TRA2BP62995 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRA2BP62995 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRA2BP62995 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRA2BP62995 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRA2BP62995 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRA2BP62995 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRA2BP62995 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRA2BP62995 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRA2BP62995 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRA2BP62995 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRA2BP62995 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRA2BP62995 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRA2BP62995 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.24□□□□□ -0.13
TRA2BP62995 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TRA2BP62995 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.24□□□□□ -0.13
TRA2BP62995 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.24□□□□□ -0.13
TRA2BP62995 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRA2BP62995 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRA2BP62995 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRA2BP62995 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRA2BP62995 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRA2BP62995 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRA2BP62995 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRA2BP62995 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRA2BP62995 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRA2BP62995 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.24□□□□□ -0.13
TRA2BP62995 AC126755.1-201ENST00000525846 6405 ntBASIC14.24□□□□□ -0.13
TRA2BP62995 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.24□□□□□ -0.13
TRA2BP62995 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRA2BP62995 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRA2BP62995 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRA2BP62995 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
TRA2BP62995 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRA2BP62995 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRA2BP62995 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.23□□□□□ -0.13
TRA2BP62995 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRA2BP62995 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.23□□□□□ -0.13
TRA2BP62995 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.23□□□□□ -0.13
TRA2BP62995 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRA2BP62995 AC134312.5-201ENST00000568031 1313 ntBASIC14.23□□□□□ -0.13
TRA2BP62995 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRA2BP62995 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRA2BP62995 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.23□□□□□ -0.13
TRA2BP62995 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.23□□□□□ -0.13
TRA2BP62995 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRA2BP62995 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRA2BP62995 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TRA2BP62995 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.23□□□□□ -0.13
TRA2BP62995 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRA2BP62995 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRA2BP62995 HMGN1P19-201ENST00000436976 333 ntBASIC14.23□□□□□ -0.13
TRA2BP62995 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRA2BP62995 AC011495.1-201ENST00000498085 584 ntBASIC14.23□□□□□ -0.13
TRA2BP62995 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
TRA2BP62995 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.23□□□□□ -0.13
TRA2BP62995 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TRA2BP62995 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
TRA2BP62995 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
TRA2BP62995 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.23□□□□□ -0.13
TRA2BP62995 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.23□□□□□ -0.13
TRA2BP62995 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.23□□□□□ -0.13
TRA2BP62995 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.23□□□□□ -0.13
TRA2BP62995 RN7SL48P-201ENST00000579283 293 ntBASIC14.23□□□□□ -0.13
TRA2BP62995 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRA2BP62995 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
TRA2BP62995 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRA2BP62995 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.23□□□□□ -0.13
TRA2BP62995 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRA2BP62995 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRA2BP62995 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.23□□□□□ -0.13
TRA2BP62995 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
TRA2BP62995 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
TRA2BP62995 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
TRA2BP62995 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRA2BP62995 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.23□□□□□ -0.13
TRA2BP62995 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRA2BP62995 AC003102.2-201ENST00000589195 1469 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms