Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.18□□□□□ -0.3
UBA52P62987 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBA52P62987 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBA52P62987 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBA52P62987 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBA52P62987 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
UBA52P62987 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBA52P62987 AC007541.1-201ENST00000570282 1469 ntBASIC13.18□□□□□ -0.3
UBA52P62987 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBA52P62987 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBA52P62987 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
UBA52P62987 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBA52P62987 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
UBA52P62987 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
UBA52P62987 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBA52P62987 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.18□□□□□ -0.3
UBA52P62987 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBA52P62987 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
UBA52P62987 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBA52P62987 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
UBA52P62987 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.18□□□□□ -0.3
UBA52P62987 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBA52P62987 FAM220BP-201ENST00000377689 816 ntBASIC13.18□□□□□ -0.3
UBA52P62987 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBA52P62987 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.18□□□□□ -0.3
UBA52P62987 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBA52P62987 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
UBA52P62987 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.18□□□□□ -0.3
UBA52P62987 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.18□□□□□ -0.3
UBA52P62987 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.18□□□□□ -0.3
UBA52P62987 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.18□□□□□ -0.3
UBA52P62987 SPTSSB-204ENST00000617024 1292 ntBASIC13.18□□□□□ -0.3
UBA52P62987 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.18□□□□□ -0.3
UBA52P62987 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBA52P62987 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
UBA52P62987 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBA52P62987 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.18□□□□□ -0.3
UBA52P62987 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.18□□□□□ -0.3
UBA52P62987 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBA52P62987 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBA52P62987 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBA52P62987 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBA52P62987 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBA52P62987 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
UBA52P62987 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBA52P62987 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.18□□□□□ -0.3
UBA52P62987 FOXO1B-201ENST00000504678 1527 ntBASIC13.18□□□□□ -0.3
UBA52P62987 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBA52P62987 AC092135.3-201ENST00000624151 1846 ntBASIC13.18□□□□□ -0.3
UBA52P62987 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBA52P62987 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBA52P62987 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
UBA52P62987 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
UBA52P62987 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UBA52P62987 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.17□□□□□ -0.3
UBA52P62987 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.17□□□□□ -0.3
UBA52P62987 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBA52P62987 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
UBA52P62987 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBA52P62987 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
UBA52P62987 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBA52P62987 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.17□□□□□ -0.3
UBA52P62987 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UBA52P62987 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBA52P62987 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
UBA52P62987 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
UBA52P62987 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBA52P62987 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
UBA52P62987 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
UBA52P62987 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBA52P62987 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.17□□□□□ -0.3
UBA52P62987 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.17□□□□□ -0.3
UBA52P62987 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBA52P62987 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBA52P62987 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.17□□□□□ -0.3
UBA52P62987 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBA52P62987 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.17□□□□□ -0.3
UBA52P62987 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.17□□□□□ -0.3
UBA52P62987 AL353779.1-201ENST00000434793 351 ntBASIC13.17□□□□□ -0.3
UBA52P62987 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.17□□□□□ -0.3
UBA52P62987 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.17□□□□□ -0.3
UBA52P62987 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.17□□□□□ -0.3
UBA52P62987 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.17□□□□□ -0.3
UBA52P62987 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.17□□□□□ -0.3
UBA52P62987 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
UBA52P62987 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.17□□□□□ -0.3
UBA52P62987 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.17□□□□□ -0.3
UBA52P62987 AC009407.1-201ENST00000568958 598 ntBASIC13.17□□□□□ -0.3
UBA52P62987 AC140912.1-201ENST00000577171 1054 ntBASIC13.17□□□□□ -0.3
UBA52P62987 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.17□□□□□ -0.3
UBA52P62987 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.17□□□□□ -0.3
UBA52P62987 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.17□□□□□ -0.3
UBA52P62987 RN7SL828P-201ENST00000607615 303 ntBASIC13.17□□□□□ -0.3
UBA52P62987 AL844908.2-201ENST00000609461 460 ntBASIC13.17□□□□□ -0.3
UBA52P62987 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
UBA52P62987 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
UBA52P62987 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.17□□□□□ -0.3
UBA52P62987 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBA52P62987 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBA52P62987 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms