Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.46□□□□□ -0.1
NR1H2P55055 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
NR1H2P55055 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.46□□□□□ -0.1
NR1H2P55055 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
NR1H2P55055 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.46□□□□□ -0.1
NR1H2P55055 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.46□□□□□ -0.1
NR1H2P55055 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
NR1H2P55055 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.46□□□□□ -0.1
NR1H2P55055 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NR1H2P55055 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NR1H2P55055 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.45□□□□□ -0.1
NR1H2P55055 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.45□□□□□ -0.1
NR1H2P55055 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.45□□□□□ -0.1
NR1H2P55055 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NR1H2P55055 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NR1H2P55055 AC015909.5-201ENST00000624336 2266 ntBASIC14.45□□□□□ -0.1
NR1H2P55055 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
NR1H2P55055 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.45□□□□□ -0.1
NR1H2P55055 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
NR1H2P55055 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
NR1H2P55055 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NR1H2P55055 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NR1H2P55055 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
NR1H2P55055 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.45□□□□□ -0.1
NR1H2P55055 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NR1H2P55055 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.45□□□□□ -0.1
NR1H2P55055 NUTM2HP-201ENST00000442076 2498 ntBASIC14.45□□□□□ -0.1
NR1H2P55055 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.45□□□□□ -0.1
NR1H2P55055 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.45□□□□□ -0.1
NR1H2P55055 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
NR1H2P55055 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.45□□□□□ -0.1
NR1H2P55055 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.45□□□□□ -0.1
NR1H2P55055 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.45□□□□□ -0.1
NR1H2P55055 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.45□□□□□ -0.1
NR1H2P55055 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.45□□□□□ -0.1
NR1H2P55055 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.45□□□□□ -0.1
NR1H2P55055 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NR1H2P55055 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NR1H2P55055 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
NR1H2P55055 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.45□□□□□ -0.1
NR1H2P55055 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
NR1H2P55055 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NR1H2P55055 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
NR1H2P55055 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.45□□□□□ -0.1
NR1H2P55055 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.45□□□□□ -0.1
NR1H2P55055 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NR1H2P55055 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.44□□□□□ -0.1
NR1H2P55055 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.44□□□□□ -0.1
NR1H2P55055 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.44□□□□□ -0.1
NR1H2P55055 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.44□□□□□ -0.1
NR1H2P55055 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.44□□□□□ -0.1
NR1H2P55055 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
NR1H2P55055 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NR1H2P55055 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
NR1H2P55055 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
NR1H2P55055 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
NR1H2P55055 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NR1H2P55055 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NR1H2P55055 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.44□□□□□ -0.1
NR1H2P55055 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NR1H2P55055 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NR1H2P55055 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
NR1H2P55055 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
NR1H2P55055 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.44□□□□□ -0.1
NR1H2P55055 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
NR1H2P55055 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NR1H2P55055 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NR1H2P55055 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NR1H2P55055 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.44□□□□□ -0.1
NR1H2P55055 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NR1H2P55055 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NR1H2P55055 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NR1H2P55055 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
NR1H2P55055 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
NR1H2P55055 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.44□□□□□ -0.1
NR1H2P55055 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.44□□□□□ -0.1
NR1H2P55055 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.44□□□□□ -0.1
NR1H2P55055 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.44□□□□□ -0.1
NR1H2P55055 GPS2P2-201ENST00000430745 888 ntBASIC14.44□□□□□ -0.1
NR1H2P55055 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.44□□□□□ -0.1
NR1H2P55055 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
NR1H2P55055 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.44□□□□□ -0.1
NR1H2P55055 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.44□□□□□ -0.1
NR1H2P55055 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NR1H2P55055 KRT18P34-201ENST00000488218 1270 ntBASIC14.44□□□□□ -0.1
NR1H2P55055 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NR1H2P55055 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.44□□□□□ -0.1
NR1H2P55055 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.44□□□□□ -0.1
NR1H2P55055 MIR4745-201ENST00000577608 62 ntBASIC14.44□□□□□ -0.1
NR1H2P55055 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.44□□□□□ -0.1
NR1H2P55055 AC027307.2-201ENST00000591252 911 ntBASIC14.44□□□□□ -0.1
NR1H2P55055 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NR1H2P55055 AJ011932.1-201ENST00000621707 465 ntBASIC14.44□□□□□ -0.1
NR1H2P55055 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NR1H2P55055 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.44□□□□□ -0.1
NR1H2P55055 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.44□□□□□ -0.1
NR1H2P55055 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NR1H2P55055 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.44□□□□□ -0.1
NR1H2P55055 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NR1H2P55055 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms