Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 NORAD-201ENST00000565493 5339 ntBASIC16.66■□□□□ 0.26
GPC3P51654 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.66■□□□□ 0.26
GPC3P51654 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
GPC3P51654 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
GPC3P51654 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.66■□□□□ 0.26
GPC3P51654 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GPC3P51654 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GPC3P51654 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GPC3P51654 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GPC3P51654 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GPC3P51654 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GPC3P51654 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
GPC3P51654 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
GPC3P51654 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GPC3P51654 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
GPC3P51654 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.66■□□□□ 0.26
GPC3P51654 AL023775.1-201ENST00000454907 1746 ntBASIC16.66■□□□□ 0.26
GPC3P51654 AC099548.2-209ENST00000480264 625 ntBASIC16.66■□□□□ 0.26
GPC3P51654 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GPC3P51654 ZNF767P-206ENST00000513792 565 ntBASIC16.66■□□□□ 0.26
GPC3P51654 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.66■□□□□ 0.26
GPC3P51654 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.66■□□□□ 0.26
GPC3P51654 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.66■□□□□ 0.26
GPC3P51654 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.66■□□□□ 0.26
GPC3P51654 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
GPC3P51654 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
GPC3P51654 RN7SL713P-201ENST00000582127 302 ntBASIC16.66■□□□□ 0.26
GPC3P51654 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.66■□□□□ 0.26
GPC3P51654 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
GPC3P51654 AC243960.2-201ENST00000600996 747 ntBASIC16.66■□□□□ 0.26
GPC3P51654 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.66■□□□□ 0.26
GPC3P51654 AC073413.1-201ENST00000603927 732 ntBASIC16.66■□□□□ 0.26
GPC3P51654 AL118558.3-201ENST00000607414 1079 ntBASIC16.66■□□□□ 0.26
GPC3P51654 AC244093.1-201ENST00000610837 814 ntBASIC16.66■□□□□ 0.26
GPC3P51654 AC005695.3-201ENST00000614522 232 ntBASIC16.66■□□□□ 0.26
GPC3P51654 AC138466.3-201ENST00000619983 221 ntBASIC16.66■□□□□ 0.26
GPC3P51654 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.66■□□□□ 0.26
GPC3P51654 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GPC3P51654 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
GPC3P51654 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.66■□□□□ 0.26
GPC3P51654 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GPC3P51654 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GPC3P51654 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GPC3P51654 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
GPC3P51654 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
GPC3P51654 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GPC3P51654 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GPC3P51654 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GPC3P51654 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GPC3P51654 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.66■□□□□ 0.26
GPC3P51654 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GPC3P51654 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
GPC3P51654 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.66■□□□□ 0.26
GPC3P51654 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
GPC3P51654 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
GPC3P51654 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GPC3P51654 AC067930.6-201ENST00000623257 4947 ntBASIC16.65■□□□□ 0.26
GPC3P51654 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.65■□□□□ 0.26
GPC3P51654 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GPC3P51654 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
GPC3P51654 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GPC3P51654 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.65■□□□□ 0.26
GPC3P51654 ZBED1P1-201ENST00000502364 1930 ntBASIC16.65■□□□□ 0.26
GPC3P51654 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GPC3P51654 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
GPC3P51654 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
GPC3P51654 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GPC3P51654 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.65■□□□□ 0.26
GPC3P51654 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GPC3P51654 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GPC3P51654 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.65■□□□□ 0.26
GPC3P51654 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
GPC3P51654 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.65■□□□□ 0.26
GPC3P51654 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.65■□□□□ 0.26
GPC3P51654 MESTP3-201ENST00000503460 968 ntBASIC16.65■□□□□ 0.26
GPC3P51654 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
GPC3P51654 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.65■□□□□ 0.26
GPC3P51654 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
GPC3P51654 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.65■□□□□ 0.26
GPC3P51654 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GPC3P51654 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GPC3P51654 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GPC3P51654 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.65■□□□□ 0.26
GPC3P51654 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GPC3P51654 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.65■□□□□ 0.26
GPC3P51654 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GPC3P51654 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.65■□□□□ 0.26
GPC3P51654 TNRC18P2-201ENST00000417666 2714 ntBASIC16.65■□□□□ 0.26
GPC3P51654 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GPC3P51654 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
GPC3P51654 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
GPC3P51654 AL137783.1-201ENST00000623494 1896 ntBASIC16.65■□□□□ 0.26
GPC3P51654 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GPC3P51654 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
GPC3P51654 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
GPC3P51654 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
GPC3P51654 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GPC3P51654 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
GPC3P51654 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GPC3P51654 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms