Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HCFC1P51610 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
HCFC1P51610 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HCFC1P51610 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HCFC1P51610 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
HCFC1P51610 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HCFC1P51610 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.07□□□□□ -0.32
HCFC1P51610 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.07□□□□□ -0.32
HCFC1P51610 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HCFC1P51610 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.07□□□□□ -0.32
HCFC1P51610 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
HCFC1P51610 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HCFC1P51610 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HCFC1P51610 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HCFC1P51610 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HCFC1P51610 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
HCFC1P51610 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
HCFC1P51610 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
HCFC1P51610 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC13.07□□□□□ -0.32
HCFC1P51610 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.07□□□□□ -0.32
HCFC1P51610 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HCFC1P51610 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HCFC1P51610 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.07□□□□□ -0.32
HCFC1P51610 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HCFC1P51610 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
HCFC1P51610 STUB1-204ENST00000564370 875 ntTSL 2 BASIC13.07□□□□□ -0.32
HCFC1P51610 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC13.07□□□□□ -0.32
HCFC1P51610 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC13.07□□□□□ -0.32
HCFC1P51610 CENPX-208ENST00000584347 799 ntTSL 2 BASIC13.07□□□□□ -0.32
HCFC1P51610 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HCFC1P51610 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC13.07□□□□□ -0.32
HCFC1P51610 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HCFC1P51610 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC13.07□□□□□ -0.32
HCFC1P51610 AL136301.1-201ENST00000615830 422 ntBASIC13.07□□□□□ -0.32
HCFC1P51610 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HCFC1P51610 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HCFC1P51610 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.07□□□□□ -0.32
HCFC1P51610 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HCFC1P51610 AL138725.1-201ENST00000407347 1314 ntBASIC13.07□□□□□ -0.32
HCFC1P51610 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
HCFC1P51610 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HCFC1P51610 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HCFC1P51610 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.07□□□□□ -0.32
HCFC1P51610 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HCFC1P51610 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.07□□□□□ -0.32
HCFC1P51610 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
HCFC1P51610 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.07□□□□□ -0.32
HCFC1P51610 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
HCFC1P51610 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
HCFC1P51610 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
HCFC1P51610 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HCFC1P51610 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HCFC1P51610 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.07□□□□□ -0.32
HCFC1P51610 KRT8P29-201ENST00000420409 1371 ntBASIC13.07□□□□□ -0.32
HCFC1P51610 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
HCFC1P51610 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HCFC1P51610 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HCFC1P51610 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HCFC1P51610 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.06□□□□□ -0.32
HCFC1P51610 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HCFC1P51610 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HCFC1P51610 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
HCFC1P51610 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HCFC1P51610 AC026316.1-201ENST00000398900 414 ntBASIC13.06□□□□□ -0.32
HCFC1P51610 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
HCFC1P51610 KRT18P36-201ENST00000411618 1276 ntBASIC13.06□□□□□ -0.32
HCFC1P51610 RN7SL67P-201ENST00000492147 296 ntBASIC13.06□□□□□ -0.32
HCFC1P51610 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC13.06□□□□□ -0.32
HCFC1P51610 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.06□□□□□ -0.32
HCFC1P51610 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
HCFC1P51610 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.06□□□□□ -0.32
HCFC1P51610 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC13.06□□□□□ -0.32
HCFC1P51610 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.06□□□□□ -0.32
HCFC1P51610 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HCFC1P51610 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.06□□□□□ -0.32
HCFC1P51610 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HCFC1P51610 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HCFC1P51610 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HCFC1P51610 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
HCFC1P51610 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HCFC1P51610 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HCFC1P51610 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.06□□□□□ -0.32
HCFC1P51610 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.06□□□□□ -0.32
HCFC1P51610 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.06□□□□□ -0.32
HCFC1P51610 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HCFC1P51610 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HCFC1P51610 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
HCFC1P51610 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
HCFC1P51610 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
HCFC1P51610 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.06□□□□□ -0.32
HCFC1P51610 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HCFC1P51610 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC13.06□□□□□ -0.32
HCFC1P51610 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HCFC1P51610 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
HCFC1P51610 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HCFC1P51610 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HCFC1P51610 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HCFC1P51610 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
HCFC1P51610 HNRNPA1P41-201ENST00000397777 928 ntBASIC13.06□□□□□ -0.32
HCFC1P51610 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms