Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.76■□□□□ 0.43
MRE11P49959 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MRE11P49959 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MRE11P49959 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
MRE11P49959 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.76■□□□□ 0.43
MRE11P49959 AC015818.8-201ENST00000587907 1519 ntBASIC17.76■□□□□ 0.43
MRE11P49959 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MRE11P49959 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
MRE11P49959 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MRE11P49959 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MRE11P49959 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
MRE11P49959 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
MRE11P49959 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MRE11P49959 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MRE11P49959 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MRE11P49959 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.75■□□□□ 0.43
MRE11P49959 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.75■□□□□ 0.43
MRE11P49959 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
MRE11P49959 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MRE11P49959 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MRE11P49959 HAL-202ENST00000538703 2637 ntTSL 2 BASIC17.75■□□□□ 0.43
MRE11P49959 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MRE11P49959 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
MRE11P49959 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.75■□□□□ 0.43
MRE11P49959 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
MRE11P49959 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC17.75■□□□□ 0.43
MRE11P49959 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
MRE11P49959 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
MRE11P49959 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MRE11P49959 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
MRE11P49959 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MRE11P49959 RPL5P21-201ENST00000404620 815 ntBASIC17.75■□□□□ 0.43
MRE11P49959 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.75■□□□□ 0.43
MRE11P49959 CNN2P2-201ENST00000443536 909 ntBASIC17.75■□□□□ 0.43
MRE11P49959 CNN2P3-201ENST00000450201 906 ntBASIC17.75■□□□□ 0.43
MRE11P49959 AC108073.2-201ENST00000464002 357 ntBASIC17.75■□□□□ 0.43
MRE11P49959 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.75■□□□□ 0.43
MRE11P49959 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.75■□□□□ 0.43
MRE11P49959 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.75■□□□□ 0.43
MRE11P49959 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
MRE11P49959 AL662799.1-202ENST00000614205 422 ntBASIC17.75■□□□□ 0.43
MRE11P49959 AL136317.3-201ENST00000618497 906 ntBASIC17.75■□□□□ 0.43
MRE11P49959 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
MRE11P49959 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MRE11P49959 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MRE11P49959 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
MRE11P49959 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MRE11P49959 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MRE11P49959 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
MRE11P49959 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MRE11P49959 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MRE11P49959 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
MRE11P49959 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
MRE11P49959 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC17.74■□□□□ 0.43
MRE11P49959 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MRE11P49959 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
MRE11P49959 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MRE11P49959 CICP11-201ENST00000434745 2827 ntBASIC17.74■□□□□ 0.43
MRE11P49959 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MRE11P49959 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MRE11P49959 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
MRE11P49959 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.74■□□□□ 0.43
MRE11P49959 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.74■□□□□ 0.43
MRE11P49959 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.74■□□□□ 0.43
MRE11P49959 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
MRE11P49959 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.74■□□□□ 0.43
MRE11P49959 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.74■□□□□ 0.43
MRE11P49959 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.74■□□□□ 0.43
MRE11P49959 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MRE11P49959 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC17.74■□□□□ 0.43
MRE11P49959 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
MRE11P49959 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MRE11P49959 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
MRE11P49959 DKFZP434A062-201ENST00000573103 5021 ntBASIC17.74■□□□□ 0.43
MRE11P49959 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.74■□□□□ 0.43
MRE11P49959 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MRE11P49959 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
MRE11P49959 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MRE11P49959 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MRE11P49959 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MRE11P49959 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
MRE11P49959 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MRE11P49959 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MRE11P49959 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MRE11P49959 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
MRE11P49959 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC17.74■□□□□ 0.43
MRE11P49959 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
MRE11P49959 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
MRE11P49959 BCAR1-209ENST00000546196 1340 ntBASIC17.73■□□□□ 0.43
MRE11P49959 INVS-201ENST00000262456 2968 ntTSL 5 BASIC17.73■□□□□ 0.43
MRE11P49959 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.73■□□□□ 0.43
MRE11P49959 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MRE11P49959 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MRE11P49959 AL589702.1-201ENST00000641229 1509 ntBASIC17.73■□□□□ 0.43
MRE11P49959 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MRE11P49959 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MRE11P49959 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MRE11P49959 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
MRE11P49959 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC17.73■□□□□ 0.43
MRE11P49959 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms