Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.77■□□□□ 0.11
MMP13P45452 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
MMP13P45452 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.77■□□□□ 0.11
MMP13P45452 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
MMP13P45452 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MMP13P45452 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MMP13P45452 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MMP13P45452 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MMP13P45452 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP13P45452 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
MMP13P45452 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP13P45452 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
MMP13P45452 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP13P45452 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MMP13P45452 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.76■□□□□ 0.11
MMP13P45452 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP13P45452 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MMP13P45452 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP13P45452 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP13P45452 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP13P45452 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP13P45452 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP13P45452 GHSR-202ENST00000427970 912 ntBASIC15.76■□□□□ 0.11
MMP13P45452 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.76■□□□□ 0.11
MMP13P45452 RPL13AP25-201ENST00000484130 612 ntBASIC15.76■□□□□ 0.11
MMP13P45452 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MMP13P45452 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.76■□□□□ 0.11
MMP13P45452 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.76■□□□□ 0.11
MMP13P45452 API5-211ENST00000534695 560 ntTSL 5 BASIC15.76■□□□□ 0.11
MMP13P45452 AC190387.1-201ENST00000551683 408 ntBASIC15.76■□□□□ 0.11
MMP13P45452 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MMP13P45452 CHCHD2P3-201ENST00000603038 451 ntBASIC15.76■□□□□ 0.11
MMP13P45452 MIR8072-201ENST00000614241 80 ntBASIC15.76■□□□□ 0.11
MMP13P45452 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MMP13P45452 AC007431.3-201ENST00000623221 587 ntBASIC15.76■□□□□ 0.11
MMP13P45452 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MMP13P45452 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP13P45452 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.76■□□□□ 0.11
MMP13P45452 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
MMP13P45452 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP13P45452 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP13P45452 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP13P45452 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP13P45452 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.76■□□□□ 0.11
MMP13P45452 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.76■□□□□ 0.11
MMP13P45452 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP13P45452 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP13P45452 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP13P45452 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP13P45452 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP13P45452 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
MMP13P45452 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP13P45452 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
MMP13P45452 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP13P45452 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP13P45452 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.75■□□□□ 0.11
MMP13P45452 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.75■□□□□ 0.11
MMP13P45452 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP13P45452 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MMP13P45452 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MMP13P45452 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP13P45452 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
MMP13P45452 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.75■□□□□ 0.11
MMP13P45452 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP13P45452 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MMP13P45452 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MMP13P45452 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.75■□□□□ 0.11
MMP13P45452 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.75■□□□□ 0.11
MMP13P45452 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP13P45452 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MMP13P45452 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MMP13P45452 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP13P45452 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.75■□□□□ 0.11
MMP13P45452 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
MMP13P45452 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.75■□□□□ 0.11
MMP13P45452 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.75■□□□□ 0.11
MMP13P45452 AL645728.2-202ENST00000641679 227 ntBASIC15.75■□□□□ 0.11
MMP13P45452 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
MMP13P45452 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP13P45452 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MMP13P45452 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.75■□□□□ 0.11
MMP13P45452 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
MMP13P45452 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
MMP13P45452 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MMP13P45452 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP13P45452 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP13P45452 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP13P45452 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP13P45452 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MMP13P45452 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
MMP13P45452 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
MMP13P45452 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.75■□□□□ 0.11
MMP13P45452 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.74■□□□□ 0.11
MMP13P45452 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.74■□□□□ 0.11
MMP13P45452 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP13P45452 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP13P45452 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.74■□□□□ 0.11
MMP13P45452 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.74■□□□□ 0.11
MMP13P45452 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.74■□□□□ 0.11
MMP13P45452 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms