Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NFKB1P19838 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NFKB1P19838 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.41■□□□□ 0.06
NFKB1P19838 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
NFKB1P19838 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.41■□□□□ 0.06
NFKB1P19838 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NFKB1P19838 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.4■□□□□ 0.06
NFKB1P19838 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NFKB1P19838 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.4■□□□□ 0.06
NFKB1P19838 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NFKB1P19838 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
NFKB1P19838 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NFKB1P19838 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
NFKB1P19838 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NFKB1P19838 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.4■□□□□ 0.06
NFKB1P19838 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.4■□□□□ 0.06
NFKB1P19838 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
NFKB1P19838 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
NFKB1P19838 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
NFKB1P19838 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.4■□□□□ 0.06
NFKB1P19838 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.4■□□□□ 0.06
NFKB1P19838 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.4■□□□□ 0.06
NFKB1P19838 AC114812.1-204ENST00000449669 728 ntBASIC15.4■□□□□ 0.06
NFKB1P19838 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NFKB1P19838 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.4■□□□□ 0.06
NFKB1P19838 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NFKB1P19838 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NFKB1P19838 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.4■□□□□ 0.06
NFKB1P19838 DUX4L47-201ENST00000566374 394 ntBASIC15.4■□□□□ 0.06
NFKB1P19838 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
NFKB1P19838 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.4■□□□□ 0.06
NFKB1P19838 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.4■□□□□ 0.06
NFKB1P19838 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.4■□□□□ 0.06
NFKB1P19838 AL033527.5-201ENST00000641382 801 ntBASIC15.4■□□□□ 0.06
NFKB1P19838 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
NFKB1P19838 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.4■□□□□ 0.06
NFKB1P19838 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.4■□□□□ 0.06
NFKB1P19838 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.4■□□□□ 0.06
NFKB1P19838 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NFKB1P19838 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NFKB1P19838 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
NFKB1P19838 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NFKB1P19838 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
NFKB1P19838 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
NFKB1P19838 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NFKB1P19838 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NFKB1P19838 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NFKB1P19838 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
NFKB1P19838 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
NFKB1P19838 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NFKB1P19838 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
NFKB1P19838 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NFKB1P19838 AC055811.4-201ENST00000624039 1754 ntBASIC15.39■□□□□ 0.05
NFKB1P19838 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NFKB1P19838 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
NFKB1P19838 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NFKB1P19838 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
NFKB1P19838 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
NFKB1P19838 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.39■□□□□ 0.05
NFKB1P19838 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
NFKB1P19838 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.39■□□□□ 0.05
NFKB1P19838 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.39■□□□□ 0.05
NFKB1P19838 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.39■□□□□ 0.05
NFKB1P19838 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
NFKB1P19838 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NFKB1P19838 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.39■□□□□ 0.05
NFKB1P19838 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.39■□□□□ 0.05
NFKB1P19838 EIF3FP3-201ENST00000434851 1086 ntBASIC15.39■□□□□ 0.05
NFKB1P19838 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.39■□□□□ 0.05
NFKB1P19838 AC022616.1-201ENST00000518688 554 ntBASIC15.39■□□□□ 0.05
NFKB1P19838 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.39■□□□□ 0.05
NFKB1P19838 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.39■□□□□ 0.05
NFKB1P19838 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.39■□□□□ 0.05
NFKB1P19838 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NFKB1P19838 AC092364.2-202ENST00000597012 1073 ntBASIC15.39■□□□□ 0.05
NFKB1P19838 AP005019.2-201ENST00000615104 511 ntBASIC15.39■□□□□ 0.05
NFKB1P19838 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.39■□□□□ 0.05
NFKB1P19838 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NFKB1P19838 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NFKB1P19838 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NFKB1P19838 AC023908.3-201ENST00000564211 3047 ntBASIC15.39■□□□□ 0.05
NFKB1P19838 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.39■□□□□ 0.05
NFKB1P19838 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
NFKB1P19838 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NFKB1P19838 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NFKB1P19838 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.39■□□□□ 0.05
NFKB1P19838 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
NFKB1P19838 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
NFKB1P19838 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NFKB1P19838 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NFKB1P19838 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
NFKB1P19838 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NFKB1P19838 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
NFKB1P19838 LRRC59-203ENST00000576448 1531 ntBASIC15.38■□□□□ 0.05
NFKB1P19838 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.38■□□□□ 0.05
NFKB1P19838 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
NFKB1P19838 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NFKB1P19838 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NFKB1P19838 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NFKB1P19838 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms