Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 CR383656.12-201ENST00000549567 513 ntBASIC15.3■□□□□ 0.04
VCLP18206 AC084364.1-201ENST00000551967 1556 ntBASIC15.3■□□□□ 0.04
VCLP18206 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.3■□□□□ 0.04
VCLP18206 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.3■□□□□ 0.04
VCLP18206 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.3■□□□□ 0.04
VCLP18206 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VCLP18206 BRI3BPP1-201ENST00000594224 787 ntBASIC15.3■□□□□ 0.04
VCLP18206 AC148477.4-201ENST00000613430 1793 ntBASIC15.3■□□□□ 0.04
VCLP18206 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VCLP18206 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.3■□□□□ 0.04
VCLP18206 AC005252.3-201ENST00000623855 2258 ntBASIC15.3■□□□□ 0.04
VCLP18206 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
VCLP18206 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
VCLP18206 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VCLP18206 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VCLP18206 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VCLP18206 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.29■□□□□ 0.04
VCLP18206 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.29■□□□□ 0.04
VCLP18206 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
VCLP18206 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
VCLP18206 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
VCLP18206 INTS4P2-202ENST00000614726 2019 ntBASIC15.29■□□□□ 0.04
VCLP18206 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.29■□□□□ 0.04
VCLP18206 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VCLP18206 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VCLP18206 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.29■□□□□ 0.04
VCLP18206 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
VCLP18206 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.29■□□□□ 0.04
VCLP18206 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VCLP18206 AL365209.1-201ENST00000624418 6473 ntBASIC15.29■□□□□ 0.04
VCLP18206 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
VCLP18206 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.29■□□□□ 0.04
VCLP18206 AC063926.2-201ENST00000623766 1308 ntBASIC15.29■□□□□ 0.04
VCLP18206 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VCLP18206 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
VCLP18206 AC005034.1-201ENST00000426657 489 ntBASIC15.29■□□□□ 0.04
VCLP18206 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.29■□□□□ 0.04
VCLP18206 AL162726.2-201ENST00000438986 1017 ntBASIC15.29■□□□□ 0.04
VCLP18206 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.29■□□□□ 0.04
VCLP18206 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.29■□□□□ 0.04
VCLP18206 WASH4P-201ENST00000564273 1246 ntBASIC15.29■□□□□ 0.04
VCLP18206 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.29■□□□□ 0.04
VCLP18206 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.29■□□□□ 0.04
VCLP18206 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.29■□□□□ 0.04
VCLP18206 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
VCLP18206 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.29■□□□□ 0.04
VCLP18206 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
VCLP18206 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VCLP18206 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
VCLP18206 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
VCLP18206 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
VCLP18206 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
VCLP18206 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.29■□□□□ 0.04
VCLP18206 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
VCLP18206 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VCLP18206 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VCLP18206 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
VCLP18206 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.29■□□□□ 0.04
VCLP18206 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.29■□□□□ 0.04
VCLP18206 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VCLP18206 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.29■□□□□ 0.04
VCLP18206 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
VCLP18206 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
VCLP18206 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VCLP18206 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.28■□□□□ 0.04
VCLP18206 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
VCLP18206 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
VCLP18206 FGD5P1-202ENST00000614866 2498 ntBASIC15.28■□□□□ 0.04
VCLP18206 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VCLP18206 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.28■□□□□ 0.04
VCLP18206 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VCLP18206 AC010327.5-201ENST00000586923 3061 ntBASIC15.28■□□□□ 0.04
VCLP18206 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
VCLP18206 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
VCLP18206 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VCLP18206 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VCLP18206 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VCLP18206 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.28■□□□□ 0.04
VCLP18206 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.28■□□□□ 0.04
VCLP18206 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VCLP18206 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
VCLP18206 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.28■□□□□ 0.04
VCLP18206 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VCLP18206 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
VCLP18206 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VCLP18206 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VCLP18206 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VCLP18206 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VCLP18206 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.28■□□□□ 0.04
VCLP18206 AC098850.1-201ENST00000419919 790 ntBASIC15.28■□□□□ 0.04
VCLP18206 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
VCLP18206 NME2P1-201ENST00000426182 414 ntBASIC15.28■□□□□ 0.04
VCLP18206 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
VCLP18206 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.28■□□□□ 0.04
VCLP18206 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.28■□□□□ 0.04
VCLP18206 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.28■□□□□ 0.04
VCLP18206 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.28■□□□□ 0.04
VCLP18206 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.28■□□□□ 0.04
VCLP18206 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.28■□□□□ 0.04
VCLP18206 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms