Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3L1P16619 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3L1P16619 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3L1P16619 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3L1P16619 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
CCL3L1P16619 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3L1P16619 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
CCL3L1P16619 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3L1P16619 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3L1P16619 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CCL3L1P16619 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3L1P16619 AL355864.2-201ENST00000447420 863 ntBASIC12.51□□□□□ -0.41
CCL3L1P16619 BCRP2-202ENST00000447763 634 ntBASIC12.51□□□□□ -0.41
CCL3L1P16619 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CCL3L1P16619 BCRP6-201ENST00000510112 632 ntBASIC12.51□□□□□ -0.41
CCL3L1P16619 BCRP7-201ENST00000511549 544 ntBASIC12.51□□□□□ -0.41
CCL3L1P16619 AP001889.1-201ENST00000525414 633 ntBASIC12.51□□□□□ -0.41
CCL3L1P16619 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3L1P16619 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3L1P16619 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3L1P16619 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.51□□□□□ -0.41
CCL3L1P16619 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
CCL3L1P16619 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC12.51□□□□□ -0.41
CCL3L1P16619 AC015936.2-201ENST00000593177 259 ntBASIC12.51□□□□□ -0.41
CCL3L1P16619 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.51□□□□□ -0.41
CCL3L1P16619 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CCL3L1P16619 AL035252.4-201ENST00000624174 288 ntBASIC12.51□□□□□ -0.41
CCL3L1P16619 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3L1P16619 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3L1P16619 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.51□□□□□ -0.41
CCL3L1P16619 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.51□□□□□ -0.41
CCL3L1P16619 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3L1P16619 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3L1P16619 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3L1P16619 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3L1P16619 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3L1P16619 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3L1P16619 AC103702.1-201ENST00000548801 2630 ntBASIC12.51□□□□□ -0.41
CCL3L1P16619 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3L1P16619 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.51□□□□□ -0.41
CCL3L1P16619 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.51□□□□□ -0.41
CCL3L1P16619 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3L1P16619 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3L1P16619 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
CCL3L1P16619 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3L1P16619 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3L1P16619 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3L1P16619 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL3L1P16619 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL3L1P16619 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
CCL3L1P16619 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
CCL3L1P16619 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.5□□□□□ -0.41
CCL3L1P16619 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.5□□□□□ -0.41
CCL3L1P16619 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.5□□□□□ -0.41
CCL3L1P16619 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL3L1P16619 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL3L1P16619 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL3L1P16619 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL3L1P16619 AC007326.2-201ENST00000624224 7579 ntBASIC12.5□□□□□ -0.41
CCL3L1P16619 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CCL3L1P16619 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL3L1P16619 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
CCL3L1P16619 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL3L1P16619 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC12.5□□□□□ -0.41
CCL3L1P16619 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.5□□□□□ -0.41
CCL3L1P16619 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CCL3L1P16619 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.5□□□□□ -0.41
CCL3L1P16619 EIF3FP3-201ENST00000434851 1086 ntBASIC12.5□□□□□ -0.41
CCL3L1P16619 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL3L1P16619 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC12.5□□□□□ -0.41
CCL3L1P16619 GAPDHP21-201ENST00000450301 1010 ntBASIC12.5□□□□□ -0.41
CCL3L1P16619 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCL3L1P16619 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC12.5□□□□□ -0.41
CCL3L1P16619 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.5□□□□□ -0.41
CCL3L1P16619 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCL3L1P16619 USP32P1-208ENST00000506594 1164 ntBASIC12.5□□□□□ -0.41
CCL3L1P16619 AC022616.1-201ENST00000518688 554 ntBASIC12.5□□□□□ -0.41
CCL3L1P16619 SLC25A47P1-201ENST00000531577 414 ntBASIC12.5□□□□□ -0.41
CCL3L1P16619 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCL3L1P16619 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC12.5□□□□□ -0.41
CCL3L1P16619 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC12.5□□□□□ -0.41
CCL3L1P16619 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC12.5□□□□□ -0.41
CCL3L1P16619 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CCL3L1P16619 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CCL3L1P16619 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.5□□□□□ -0.41
CCL3L1P16619 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC12.5□□□□□ -0.41
CCL3L1P16619 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
CCL3L1P16619 AC145423.3-201ENST00000615987 467 ntBASIC12.5□□□□□ -0.41
CCL3L1P16619 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCL3L1P16619 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC12.5□□□□□ -0.41
CCL3L1P16619 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL3L1P16619 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL3L1P16619 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL3L1P16619 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCL3L1P16619 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL3L1P16619 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.5□□□□□ -0.41
CCL3L1P16619 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.5□□□□□ -0.41
CCL3L1P16619 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL3L1P16619 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
CCL3L1P16619 AC023824.1-201ENST00000562945 2975 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms