Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.65■□□□□ 0.1
BRAFP15056 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
BRAFP15056 AC044860.1-202ENST00000559481 777 ntBASIC15.65■□□□□ 0.1
BRAFP15056 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.65■□□□□ 0.1
BRAFP15056 AC138761.1-201ENST00000584393 385 ntBASIC15.65■□□□□ 0.1
BRAFP15056 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BRAFP15056 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.65■□□□□ 0.1
BRAFP15056 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.65■□□□□ 0.1
BRAFP15056 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRAFP15056 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
BRAFP15056 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
BRAFP15056 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRAFP15056 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
BRAFP15056 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRAFP15056 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BRAFP15056 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRAFP15056 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRAFP15056 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRAFP15056 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.65■□□□□ 0.1
BRAFP15056 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRAFP15056 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRAFP15056 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
BRAFP15056 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
BRAFP15056 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BRAFP15056 PTENP1-202ENST00000532280 3996 ntBASIC15.64■□□□□ 0.09
BRAFP15056 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BRAFP15056 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.64■□□□□ 0.09
BRAFP15056 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.64■□□□□ 0.09
BRAFP15056 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
BRAFP15056 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BRAFP15056 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BRAFP15056 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
BRAFP15056 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
BRAFP15056 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BRAFP15056 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BRAFP15056 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.64■□□□□ 0.09
BRAFP15056 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.64■□□□□ 0.09
BRAFP15056 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
BRAFP15056 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
BRAFP15056 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.64■□□□□ 0.09
BRAFP15056 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.64■□□□□ 0.09
BRAFP15056 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.64■□□□□ 0.09
BRAFP15056 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.64■□□□□ 0.09
BRAFP15056 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.64■□□□□ 0.09
BRAFP15056 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.64■□□□□ 0.09
BRAFP15056 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
BRAFP15056 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
BRAFP15056 AP001267.2-201ENST00000532619 2086 ntBASIC15.64■□□□□ 0.09
BRAFP15056 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
BRAFP15056 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BRAFP15056 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
BRAFP15056 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
BRAFP15056 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BRAFP15056 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
BRAFP15056 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BRAFP15056 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
BRAFP15056 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
BRAFP15056 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BRAFP15056 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.63■□□□□ 0.09
BRAFP15056 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.63■□□□□ 0.09
BRAFP15056 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BRAFP15056 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.63■□□□□ 0.09
BRAFP15056 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
BRAFP15056 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
BRAFP15056 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BRAFP15056 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BRAFP15056 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.63■□□□□ 0.09
BRAFP15056 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
BRAFP15056 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.63■□□□□ 0.09
BRAFP15056 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.63■□□□□ 0.09
BRAFP15056 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BRAFP15056 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
BRAFP15056 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BRAFP15056 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
BRAFP15056 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BRAFP15056 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
BRAFP15056 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BRAFP15056 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BRAFP15056 FO393414.2-201ENST00000405153 598 ntBASIC15.63■□□□□ 0.09
BRAFP15056 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
BRAFP15056 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
BRAFP15056 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.63■□□□□ 0.09
BRAFP15056 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.63■□□□□ 0.09
BRAFP15056 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.63■□□□□ 0.09
BRAFP15056 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.63■□□□□ 0.09
BRAFP15056 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
BRAFP15056 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.63■□□□□ 0.09
BRAFP15056 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
BRAFP15056 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.63■□□□□ 0.09
BRAFP15056 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.63■□□□□ 0.09
BRAFP15056 MIR6069-201ENST00000620069 79 ntBASIC15.63■□□□□ 0.09
BRAFP15056 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.63■□□□□ 0.09
BRAFP15056 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
BRAFP15056 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
BRAFP15056 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BRAFP15056 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
BRAFP15056 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
BRAFP15056 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
BRAFP15056 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.63■□□□□ 0.09
BRAFP15056 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms