Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RARAP10276 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.9■□□□□ 0.14
RARAP10276 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RARAP10276 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.9■□□□□ 0.14
RARAP10276 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RARAP10276 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RARAP10276 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RARAP10276 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.9■□□□□ 0.14
RARAP10276 RPL13AP25-201ENST00000484130 612 ntBASIC15.9■□□□□ 0.14
RARAP10276 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.9■□□□□ 0.14
RARAP10276 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.9■□□□□ 0.14
RARAP10276 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.9■□□□□ 0.14
RARAP10276 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.9■□□□□ 0.14
RARAP10276 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RARAP10276 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.9■□□□□ 0.14
RARAP10276 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RARAP10276 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
RARAP10276 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RARAP10276 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RARAP10276 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RARAP10276 HSPA7-201ENST00000445535 1927 ntBASIC15.9■□□□□ 0.14
RARAP10276 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.9■□□□□ 0.14
RARAP10276 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.9■□□□□ 0.14
RARAP10276 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RARAP10276 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.14
RARAP10276 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.14
RARAP10276 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.89■□□□□ 0.13
RARAP10276 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RARAP10276 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RARAP10276 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RARAP10276 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
RARAP10276 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.89■□□□□ 0.13
RARAP10276 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RARAP10276 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
RARAP10276 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RARAP10276 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RARAP10276 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RARAP10276 INTS4P2-202ENST00000614726 2019 ntBASIC15.89■□□□□ 0.13
RARAP10276 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RARAP10276 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RARAP10276 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RARAP10276 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
RARAP10276 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RARAP10276 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RARAP10276 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RARAP10276 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RARAP10276 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
RARAP10276 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
RARAP10276 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RARAP10276 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RARAP10276 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RARAP10276 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RARAP10276 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.89■□□□□ 0.13
RARAP10276 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RARAP10276 AC098850.1-201ENST00000419919 790 ntBASIC15.89■□□□□ 0.13
RARAP10276 HLA-K-203ENST00000430151 1046 ntBASIC15.89■□□□□ 0.13
RARAP10276 DFFBP1-201ENST00000433250 979 ntBASIC15.89■□□□□ 0.13
RARAP10276 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.89■□□□□ 0.13
RARAP10276 BCRP1-201ENST00000444246 691 ntBASIC15.89■□□□□ 0.13
RARAP10276 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RARAP10276 AC104596.2-201ENST00000512793 793 ntBASIC15.89■□□□□ 0.13
RARAP10276 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RARAP10276 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RARAP10276 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.89■□□□□ 0.13
RARAP10276 AC093813.1-201ENST00000605066 256 ntBASIC15.89■□□□□ 0.13
RARAP10276 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.89■□□□□ 0.13
RARAP10276 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RARAP10276 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
RARAP10276 AC006504.5-208ENST00000588784 2401 ntBASIC15.89■□□□□ 0.13
RARAP10276 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RARAP10276 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RARAP10276 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RARAP10276 AC007541.1-201ENST00000570282 1469 ntBASIC15.89■□□□□ 0.13
RARAP10276 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RARAP10276 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RARAP10276 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RARAP10276 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RARAP10276 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
RARAP10276 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.89■□□□□ 0.13
RARAP10276 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RARAP10276 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RARAP10276 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RARAP10276 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RARAP10276 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.89■□□□□ 0.13
RARAP10276 NFIC-211ENST00000641145 8399 ntBASIC15.89■□□□□ 0.13
RARAP10276 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RARAP10276 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RARAP10276 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.88■□□□□ 0.13
RARAP10276 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.88■□□□□ 0.13
RARAP10276 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
RARAP10276 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RARAP10276 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RARAP10276 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.88■□□□□ 0.13
RARAP10276 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RARAP10276 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RARAP10276 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RARAP10276 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.88■□□□□ 0.13
RARAP10276 AC134915.1-201ENST00000426461 574 ntBASIC15.88■□□□□ 0.13
RARAP10276 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.88■□□□□ 0.13
RARAP10276 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms