Protein–RNA interactions for Protein: P0DMS9

TMIGD3, Transmembrane domain-containing protein TMIGD3, humanhuman

Predicted RBP Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMIGD3P0DMS9 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 KRT8P44-201ENST00000441609 1350 ntBASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 ACKR1-201ENST00000368121 1240 ntBASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 AC007551.1-201ENST00000457394 519 ntBASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMIGD3P0DMS9 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 AC092933.1-201ENST00000393644 945 ntBASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 C2orf27AP3-201ENST00000434123 579 ntBASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 AC016694.1-201ENST00000434179 700 ntBASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 RPL7P3-201ENST00000441388 714 ntBASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 BNIP3P42-201ENST00000454982 569 ntBASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 FTH1P14-201ENST00000482930 551 ntBASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 AC022137.2-201ENST00000503482 481 ntBASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 AC106760.1-201ENST00000508690 800 ntBASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 KRT18P25-201ENST00000508931 1278 ntBASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 BNIP3P29-201ENST00000598302 571 ntBASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 AC011447.5-201ENST00000616168 564 ntBASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 AL354718.3-201ENST00000616414 581 ntBASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 CR382287.1-201ENST00000623954 586 ntBASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 MSTO2P-201ENST00000314835 1709 ntBASIC13.75□□□□□ -0.21
TMIGD3P0DMS9 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms