Protein–RNA interactions for Protein: P0C5Y9

H2AFB1, Histone H2A-Bbd type 1, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFB1P0C5Y9 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 ELK2BP-201ENST00000415014 1224 ntBASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 LINC00265-3P-201ENST00000447588 903 ntBASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 PAM16-215ENST00000577031 548 ntTSL 4 BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 AP000240.1-201ENST00000609910 452 ntBASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 AL357140.3-201ENST00000639753 1983 ntBASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
H2AFB1P0C5Y9 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.27□□□□□ -0.44
H2AFB1P0C5Y9 AC107375.1-201ENST00000564464 2231 ntBASIC12.27□□□□□ -0.44
H2AFB1P0C5Y9 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
H2AFB1P0C5Y9 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.27□□□□□ -0.44
H2AFB1P0C5Y9 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
H2AFB1P0C5Y9 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
H2AFB1P0C5Y9 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
H2AFB1P0C5Y9 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
H2AFB1P0C5Y9 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
H2AFB1P0C5Y9 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
H2AFB1P0C5Y9 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
H2AFB1P0C5Y9 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.27□□□□□ -0.44
H2AFB1P0C5Y9 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
H2AFB1P0C5Y9 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.27□□□□□ -0.44
H2AFB1P0C5Y9 AL365181.3-201ENST00000605886 3222 ntBASIC12.27□□□□□ -0.44
H2AFB1P0C5Y9 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
H2AFB1P0C5Y9 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
H2AFB1P0C5Y9 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
H2AFB1P0C5Y9 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.27□□□□□ -0.45
H2AFB1P0C5Y9 HMGA1P7-201ENST00000406908 502 ntBASIC12.27□□□□□ -0.45
H2AFB1P0C5Y9 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.27□□□□□ -0.45
H2AFB1P0C5Y9 AC087499.1-201ENST00000418141 1075 ntBASIC12.27□□□□□ -0.45
H2AFB1P0C5Y9 BET1L-206ENST00000486280 665 ntTSL 3 BASIC12.27□□□□□ -0.45
H2AFB1P0C5Y9 AC104819.1-201ENST00000504587 486 ntBASIC12.27□□□□□ -0.45
H2AFB1P0C5Y9 AC106795.1-205ENST00000512851 1056 ntBASIC12.27□□□□□ -0.45
H2AFB1P0C5Y9 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
H2AFB1P0C5Y9 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC12.27□□□□□ -0.45
H2AFB1P0C5Y9 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2AFB1P0C5Y9 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC12.27□□□□□ -0.45
H2AFB1P0C5Y9 CCNC-219ENST00000627680 896 ntTSL 5 BASIC12.27□□□□□ -0.45
H2AFB1P0C5Y9 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
H2AFB1P0C5Y9 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2AFB1P0C5Y9 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
H2AFB1P0C5Y9 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
H2AFB1P0C5Y9 AC023794.5-201ENST00000564380 2157 ntBASIC12.27□□□□□ -0.45
H2AFB1P0C5Y9 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2AFB1P0C5Y9 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2AFB1P0C5Y9 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
H2AFB1P0C5Y9 AC073439.1-201ENST00000624121 1774 ntBASIC12.27□□□□□ -0.45
H2AFB1P0C5Y9 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2AFB1P0C5Y9 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
H2AFB1P0C5Y9 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC12.27□□□□□ -0.45
H2AFB1P0C5Y9 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.45
H2AFB1P0C5Y9 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
H2AFB1P0C5Y9 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
H2AFB1P0C5Y9 PCDHA5-203ENST00000614258 4248 ntBASIC12.27□□□□□ -0.45
H2AFB1P0C5Y9 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2AFB1P0C5Y9 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
H2AFB1P0C5Y9 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
H2AFB1P0C5Y9 AC138969.3-201ENST00000546612 1459 ntBASIC12.27□□□□□ -0.45
H2AFB1P0C5Y9 AC138932.2-201ENST00000548268 1459 ntBASIC12.27□□□□□ -0.45
H2AFB1P0C5Y9 AC126755.4-201ENST00000549796 1459 ntBASIC12.27□□□□□ -0.45
H2AFB1P0C5Y9 FP325330.2-201ENST00000624219 5630 ntBASIC12.26□□□□□ -0.45
H2AFB1P0C5Y9 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
H2AFB1P0C5Y9 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.26□□□□□ -0.45
H2AFB1P0C5Y9 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
H2AFB1P0C5Y9 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
H2AFB1P0C5Y9 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms