Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFAP04085 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC14.25□□□□□ -0.13
PDGFAP04085 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
PDGFAP04085 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.25□□□□□ -0.13
PDGFAP04085 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFAP04085 AKR7A2P1-201ENST00000460134 915 ntBASIC14.25□□□□□ -0.13
PDGFAP04085 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFAP04085 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFAP04085 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
PDGFAP04085 AP006547.1-201ENST00000563435 692 ntBASIC14.25□□□□□ -0.13
PDGFAP04085 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.25□□□□□ -0.13
PDGFAP04085 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.25□□□□□ -0.13
PDGFAP04085 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.25□□□□□ -0.13
PDGFAP04085 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.25□□□□□ -0.13
PDGFAP04085 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.25□□□□□ -0.13
PDGFAP04085 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.25□□□□□ -0.13
PDGFAP04085 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFAP04085 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.25□□□□□ -0.13
PDGFAP04085 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFAP04085 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFAP04085 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PDGFAP04085 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.25□□□□□ -0.13
PDGFAP04085 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
PDGFAP04085 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
PDGFAP04085 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PDGFAP04085 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PDGFAP04085 ME2P1-201ENST00000426028 1970 ntBASIC14.25□□□□□ -0.13
PDGFAP04085 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFAP04085 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFAP04085 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFAP04085 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFAP04085 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFAP04085 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.25□□□□□ -0.13
PDGFAP04085 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFAP04085 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFAP04085 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PDGFAP04085 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.25□□□□□ -0.13
PDGFAP04085 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.25□□□□□ -0.13
PDGFAP04085 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFAP04085 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.25□□□□□ -0.13
PDGFAP04085 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFAP04085 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.24□□□□□ -0.13
PDGFAP04085 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFAP04085 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.24□□□□□ -0.13
PDGFAP04085 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PDGFAP04085 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
PDGFAP04085 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFAP04085 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFAP04085 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFAP04085 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFAP04085 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PDGFAP04085 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFAP04085 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
PDGFAP04085 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFAP04085 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFAP04085 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFAP04085 KRT8P35-201ENST00000483942 1338 ntBASIC14.24□□□□□ -0.13
PDGFAP04085 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.24□□□□□ -0.13
PDGFAP04085 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.24□□□□□ -0.13
PDGFAP04085 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.24□□□□□ -0.13
PDGFAP04085 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFAP04085 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFAP04085 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFAP04085 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFAP04085 MTX1P1-201ENST00000440904 838 ntBASIC14.24□□□□□ -0.13
PDGFAP04085 HOMER2P2-201ENST00000451621 847 ntBASIC14.24□□□□□ -0.13
PDGFAP04085 KRT18P25-201ENST00000508931 1278 ntBASIC14.24□□□□□ -0.13
PDGFAP04085 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.24□□□□□ -0.13
PDGFAP04085 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PDGFAP04085 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFAP04085 AC104982.3-201ENST00000581995 514 ntBASIC14.24□□□□□ -0.13
PDGFAP04085 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFAP04085 AC106872.11-201ENST00000605838 421 ntBASIC14.24□□□□□ -0.13
PDGFAP04085 AC244452.3-201ENST00000636814 210 ntBASIC14.24□□□□□ -0.13
PDGFAP04085 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
PDGFAP04085 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFAP04085 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFAP04085 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFAP04085 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.24□□□□□ -0.13
PDGFAP04085 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFAP04085 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFAP04085 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PDGFAP04085 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
PDGFAP04085 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.24□□□□□ -0.13
PDGFAP04085 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFAP04085 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFAP04085 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
PDGFAP04085 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.24□□□□□ -0.13
PDGFAP04085 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFAP04085 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.24□□□□□ -0.13
PDGFAP04085 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFAP04085 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFAP04085 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFAP04085 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFAP04085 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFAP04085 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.23□□□□□ -0.13
PDGFAP04085 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFAP04085 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.23□□□□□ -0.13
PDGFAP04085 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFAP04085 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms