Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VTNP04004 WASH3P-207ENST00000560956 1394 ntBASIC16.48■□□□□ 0.23
VTNP04004 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.48■□□□□ 0.23
VTNP04004 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VTNP04004 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VTNP04004 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.48■□□□□ 0.23
VTNP04004 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VTNP04004 AC091951.1-201ENST00000512854 2465 ntBASIC16.47■□□□□ 0.23
VTNP04004 CICP6-201ENST00000457191 2729 ntBASIC16.47■□□□□ 0.23
VTNP04004 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.47■□□□□ 0.23
VTNP04004 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VTNP04004 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.47■□□□□ 0.23
VTNP04004 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.47■□□□□ 0.23
VTNP04004 AC011270.2-201ENST00000624293 2550 ntBASIC16.47■□□□□ 0.23
VTNP04004 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
VTNP04004 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
VTNP04004 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
VTNP04004 E2F3P2-201ENST00000447755 1422 ntBASIC16.47■□□□□ 0.23
VTNP04004 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VTNP04004 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VTNP04004 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.47■□□□□ 0.23
VTNP04004 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
VTNP04004 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
VTNP04004 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.47■□□□□ 0.23
VTNP04004 AC073347.1-201ENST00000421633 2643 ntBASIC16.47■□□□□ 0.23
VTNP04004 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.47■□□□□ 0.23
VTNP04004 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
VTNP04004 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VTNP04004 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VTNP04004 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VTNP04004 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.47■□□□□ 0.23
VTNP04004 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
VTNP04004 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
VTNP04004 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.47■□□□□ 0.23
VTNP04004 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VTNP04004 IGHJ2P-201ENST00000454480 60 ntBASIC16.47■□□□□ 0.23
VTNP04004 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.47■□□□□ 0.23
VTNP04004 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VTNP04004 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.47■□□□□ 0.23
VTNP04004 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
VTNP04004 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VTNP04004 AL021578.1-201ENST00000613646 709 ntBASIC16.47■□□□□ 0.23
VTNP04004 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.47■□□□□ 0.23
VTNP04004 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.47■□□□□ 0.23
VTNP04004 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VTNP04004 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
VTNP04004 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
VTNP04004 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VTNP04004 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VTNP04004 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VTNP04004 AC003102.2-201ENST00000589195 1469 ntBASIC16.47■□□□□ 0.23
VTNP04004 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
VTNP04004 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
VTNP04004 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
VTNP04004 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VTNP04004 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VTNP04004 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VTNP04004 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
VTNP04004 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
VTNP04004 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VTNP04004 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VTNP04004 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
VTNP04004 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VTNP04004 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
VTNP04004 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VTNP04004 SHC1P1-201ENST00000425230 1745 ntBASIC16.46■□□□□ 0.23
VTNP04004 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.46■□□□□ 0.23
VTNP04004 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.46■□□□□ 0.23
VTNP04004 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.46■□□□□ 0.23
VTNP04004 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
VTNP04004 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VTNP04004 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
VTNP04004 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VTNP04004 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
VTNP04004 EIF4HP1-201ENST00000453115 687 ntBASIC16.46■□□□□ 0.23
VTNP04004 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.46■□□□□ 0.23
VTNP04004 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC16.46■□□□□ 0.23
VTNP04004 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.46■□□□□ 0.23
VTNP04004 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VTNP04004 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
VTNP04004 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.46■□□□□ 0.23
VTNP04004 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC16.46■□□□□ 0.23
VTNP04004 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
VTNP04004 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.46■□□□□ 0.23
VTNP04004 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
VTNP04004 AC022748.3-201ENST00000621828 275 ntBASIC16.46■□□□□ 0.23
VTNP04004 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.46■□□□□ 0.23
VTNP04004 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
VTNP04004 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VTNP04004 KRT8P29-201ENST00000420409 1371 ntBASIC16.46■□□□□ 0.23
VTNP04004 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
VTNP04004 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VTNP04004 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
VTNP04004 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.46■□□□□ 0.23
VTNP04004 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.46■□□□□ 0.23
VTNP04004 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
VTNP04004 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VTNP04004 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VTNP04004 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
VTNP04004 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms