Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND3P03897 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.5■□□□□ 0.07
MT-ND3P03897 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.5■□□□□ 0.07
MT-ND3P03897 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND3P03897 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND3P03897 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
MT-ND3P03897 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
MT-ND3P03897 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC15.5■□□□□ 0.07
MT-ND3P03897 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND3P03897 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND3P03897 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND3P03897 AC087499.5-201ENST00000452760 1342 ntBASIC15.5■□□□□ 0.07
MT-ND3P03897 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND3P03897 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.5■□□□□ 0.07
MT-ND3P03897 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
MT-ND3P03897 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND3P03897 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND3P03897 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND3P03897 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.5■□□□□ 0.07
MT-ND3P03897 AC027601.5-201ENST00000624065 2482 ntBASIC15.5■□□□□ 0.07
MT-ND3P03897 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND3P03897 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
MT-ND3P03897 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.5■□□□□ 0.07
MT-ND3P03897 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND3P03897 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND3P03897 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.5■□□□□ 0.07
MT-ND3P03897 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND3P03897 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND3P03897 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND3P03897 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND3P03897 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.5■□□□□ 0.07
MT-ND3P03897 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.5■□□□□ 0.07
MT-ND3P03897 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND3P03897 AC244107.1-201ENST00000442033 332 ntBASIC15.5■□□□□ 0.07
MT-ND3P03897 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.5■□□□□ 0.07
MT-ND3P03897 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.5■□□□□ 0.07
MT-ND3P03897 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND3P03897 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.5■□□□□ 0.07
MT-ND3P03897 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.5■□□□□ 0.07
MT-ND3P03897 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.5■□□□□ 0.07
MT-ND3P03897 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.5■□□□□ 0.07
MT-ND3P03897 AC105021.1-202ENST00000570572 669 ntBASIC15.5■□□□□ 0.07
MT-ND3P03897 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.5■□□□□ 0.07
MT-ND3P03897 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.5■□□□□ 0.07
MT-ND3P03897 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.5■□□□□ 0.07
MT-ND3P03897 AC012645.4-201ENST00000610691 1061 ntBASIC15.5■□□□□ 0.07
MT-ND3P03897 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
MT-ND3P03897 AL035252.4-201ENST00000624174 288 ntBASIC15.5■□□□□ 0.07
MT-ND3P03897 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.5■□□□□ 0.07
MT-ND3P03897 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.5■□□□□ 0.07
MT-ND3P03897 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND3P03897 AC006504.5-208ENST00000588784 2401 ntBASIC15.5■□□□□ 0.07
MT-ND3P03897 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND3P03897 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND3P03897 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND3P03897 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.5■□□□□ 0.07
MT-ND3P03897 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.5■□□□□ 0.07
MT-ND3P03897 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.5■□□□□ 0.07
MT-ND3P03897 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND3P03897 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.5■□□□□ 0.07
MT-ND3P03897 AC012508.2-201ENST00000567613 1472 ntBASIC15.5■□□□□ 0.07
MT-ND3P03897 AC097359.2-201ENST00000604992 2389 ntBASIC15.5■□□□□ 0.07
MT-ND3P03897 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
MT-ND3P03897 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND3P03897 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.5■□□□□ 0.07
MT-ND3P03897 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND3P03897 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND3P03897 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND3P03897 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.5■□□□□ 0.07
MT-ND3P03897 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
MT-ND3P03897 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND3P03897 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MT-ND3P03897 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-ND3P03897 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-ND3P03897 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.49■□□□□ 0.07
MT-ND3P03897 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-ND3P03897 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-ND3P03897 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
MT-ND3P03897 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-ND3P03897 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-ND3P03897 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MT-ND3P03897 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.49■□□□□ 0.07
MT-ND3P03897 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-ND3P03897 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MT-ND3P03897 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.49■□□□□ 0.07
MT-ND3P03897 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
MT-ND3P03897 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.49■□□□□ 0.07
MT-ND3P03897 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.49■□□□□ 0.07
MT-ND3P03897 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.49■□□□□ 0.07
MT-ND3P03897 HIST3H2BA-201ENST00000436555 524 ntBASIC15.49■□□□□ 0.07
MT-ND3P03897 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.49■□□□□ 0.07
MT-ND3P03897 TARDBPP1-201ENST00000442013 1203 ntBASIC15.49■□□□□ 0.07
MT-ND3P03897 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.49■□□□□ 0.07
MT-ND3P03897 CRB3P1-201ENST00000449338 276 ntBASIC15.49■□□□□ 0.07
MT-ND3P03897 SERBP1P5-201ENST00000510079 1181 ntBASIC15.49■□□□□ 0.07
MT-ND3P03897 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.49■□□□□ 0.07
MT-ND3P03897 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.49■□□□□ 0.07
MT-ND3P03897 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.49■□□□□ 0.07
MT-ND3P03897 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
MT-ND3P03897 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms