Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 MIR5189-201ENST00000577370 114 ntBASIC15.57■□□□□ 0.08
TOP3BO95985 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TOP3BO95985 AL118558.3-201ENST00000607414 1079 ntBASIC15.57■□□□□ 0.08
TOP3BO95985 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.57■□□□□ 0.08
TOP3BO95985 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.57■□□□□ 0.08
TOP3BO95985 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC15.57■□□□□ 0.08
TOP3BO95985 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.57■□□□□ 0.08
TOP3BO95985 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TOP3BO95985 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TOP3BO95985 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
TOP3BO95985 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TOP3BO95985 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
TOP3BO95985 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TOP3BO95985 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.57■□□□□ 0.08
TOP3BO95985 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TOP3BO95985 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TOP3BO95985 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TOP3BO95985 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.57■□□□□ 0.08
TOP3BO95985 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.57■□□□□ 0.08
TOP3BO95985 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TOP3BO95985 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TOP3BO95985 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TOP3BO95985 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.57■□□□□ 0.08
TOP3BO95985 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.57■□□□□ 0.08
TOP3BO95985 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TOP3BO95985 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.56■□□□□ 0.08
TOP3BO95985 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TOP3BO95985 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.56■□□□□ 0.08
TOP3BO95985 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TOP3BO95985 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.56■□□□□ 0.08
TOP3BO95985 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TOP3BO95985 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TOP3BO95985 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TOP3BO95985 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TOP3BO95985 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.56■□□□□ 0.08
TOP3BO95985 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TOP3BO95985 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.56■□□□□ 0.08
TOP3BO95985 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.56■□□□□ 0.08
TOP3BO95985 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TOP3BO95985 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.56■□□□□ 0.08
TOP3BO95985 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.56■□□□□ 0.08
TOP3BO95985 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TOP3BO95985 TDH-203ENST00000531764 1110 ntBASIC15.56■□□□□ 0.08
TOP3BO95985 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.56■□□□□ 0.08
TOP3BO95985 AC016629.1-201ENST00000596579 586 ntBASIC15.56■□□□□ 0.08
TOP3BO95985 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.56■□□□□ 0.08
TOP3BO95985 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.56■□□□□ 0.08
TOP3BO95985 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC15.56■□□□□ 0.08
TOP3BO95985 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TOP3BO95985 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TOP3BO95985 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TOP3BO95985 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
TOP3BO95985 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TOP3BO95985 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TOP3BO95985 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.56■□□□□ 0.08
TOP3BO95985 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.56■□□□□ 0.08
TOP3BO95985 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.56■□□□□ 0.08
TOP3BO95985 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TOP3BO95985 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TOP3BO95985 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TOP3BO95985 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.56■□□□□ 0.08
TOP3BO95985 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TOP3BO95985 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.56■□□□□ 0.08
TOP3BO95985 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TOP3BO95985 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TOP3BO95985 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TOP3BO95985 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TOP3BO95985 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TOP3BO95985 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TOP3BO95985 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TOP3BO95985 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TOP3BO95985 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.55■□□□□ 0.08
TOP3BO95985 AC140479.7-201ENST00000636301 2332 ntBASIC15.55■□□□□ 0.08
TOP3BO95985 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.55■□□□□ 0.08
TOP3BO95985 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.55■□□□□ 0.08
TOP3BO95985 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TOP3BO95985 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TOP3BO95985 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TOP3BO95985 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TOP3BO95985 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TOP3BO95985 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TOP3BO95985 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.55■□□□□ 0.08
TOP3BO95985 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TOP3BO95985 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TOP3BO95985 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TOP3BO95985 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.55■□□□□ 0.08
TOP3BO95985 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
TOP3BO95985 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC15.55■□□□□ 0.08
TOP3BO95985 SPDYE17-201ENST00000412399 783 ntBASIC15.55■□□□□ 0.08
TOP3BO95985 RPL7P3-201ENST00000441388 714 ntBASIC15.55■□□□□ 0.08
TOP3BO95985 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.55■□□□□ 0.08
TOP3BO95985 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.55■□□□□ 0.08
TOP3BO95985 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.55■□□□□ 0.08
TOP3BO95985 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.55■□□□□ 0.08
TOP3BO95985 AC092337.1-201ENST00000568699 1129 ntBASIC15.55■□□□□ 0.08
TOP3BO95985 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.55■□□□□ 0.08
TOP3BO95985 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TOP3BO95985 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.55■□□□□ 0.08
TOP3BO95985 U62317.3-201ENST00000608319 855 ntBASIC15.55■□□□□ 0.08
TOP3BO95985 AL022328.1-201ENST00000610050 478 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms