Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL5O76039 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL5O76039 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CDKL5O76039 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.6■□□□□ 0.41
CDKL5O76039 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL5O76039 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.6■□□□□ 0.41
CDKL5O76039 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL5O76039 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL5O76039 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CDKL5O76039 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL5O76039 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.6■□□□□ 0.41
CDKL5O76039 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CDKL5O76039 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL5O76039 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL5O76039 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL5O76039 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CDKL5O76039 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL5O76039 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL5O76039 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL5O76039 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CDKL5O76039 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CDKL5O76039 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDKL5O76039 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.59■□□□□ 0.41
CDKL5O76039 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDKL5O76039 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDKL5O76039 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDKL5O76039 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CDKL5O76039 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDKL5O76039 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC17.59■□□□□ 0.41
CDKL5O76039 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CDKL5O76039 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDKL5O76039 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.59■□□□□ 0.41
CDKL5O76039 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDKL5O76039 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.59■□□□□ 0.41
CDKL5O76039 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDKL5O76039 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDKL5O76039 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.59■□□□□ 0.41
CDKL5O76039 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CDKL5O76039 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDKL5O76039 KRT8P35-201ENST00000483942 1338 ntBASIC17.59■□□□□ 0.41
CDKL5O76039 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDKL5O76039 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDKL5O76039 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDKL5O76039 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.59■□□□□ 0.41
CDKL5O76039 DGCR5-201ENST00000399539 862 ntBASIC17.59■□□□□ 0.41
CDKL5O76039 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.59■□□□□ 0.41
CDKL5O76039 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.59■□□□□ 0.41
CDKL5O76039 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDKL5O76039 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CDKL5O76039 AC022137.2-201ENST00000503482 481 ntBASIC17.59■□□□□ 0.41
CDKL5O76039 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.59■□□□□ 0.41
CDKL5O76039 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDKL5O76039 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.59■□□□□ 0.41
CDKL5O76039 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDKL5O76039 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.59■□□□□ 0.41
CDKL5O76039 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.59■□□□□ 0.41
CDKL5O76039 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.59■□□□□ 0.41
CDKL5O76039 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDKL5O76039 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDKL5O76039 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CDKL5O76039 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDKL5O76039 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDKL5O76039 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDKL5O76039 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDKL5O76039 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDKL5O76039 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.58■□□□□ 0.41
CDKL5O76039 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CDKL5O76039 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CDKL5O76039 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDKL5O76039 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDKL5O76039 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDKL5O76039 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDKL5O76039 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDKL5O76039 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.41
CDKL5O76039 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDKL5O76039 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDKL5O76039 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDKL5O76039 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDKL5O76039 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.58■□□□□ 0.4
CDKL5O76039 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDKL5O76039 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDKL5O76039 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDKL5O76039 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.58■□□□□ 0.4
CDKL5O76039 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.58■□□□□ 0.4
CDKL5O76039 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDKL5O76039 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CDKL5O76039 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.58■□□□□ 0.4
CDKL5O76039 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.58■□□□□ 0.4
CDKL5O76039 AC027307.3-201ENST00000594262 1100 ntBASIC17.58■□□□□ 0.4
CDKL5O76039 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.58■□□□□ 0.4
CDKL5O76039 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CDKL5O76039 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC17.58■□□□□ 0.4
CDKL5O76039 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
CDKL5O76039 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDKL5O76039 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.58■□□□□ 0.4
CDKL5O76039 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL5O76039 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL5O76039 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL5O76039 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CDKL5O76039 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms