Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PDCD6O75340 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
PDCD6O75340 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PDCD6O75340 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PDCD6O75340 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PDCD6O75340 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PDCD6O75340 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PDCD6O75340 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC12.82□□□□□ -0.36
PDCD6O75340 AC027601.5-201ENST00000624065 2482 ntBASIC12.82□□□□□ -0.36
PDCD6O75340 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
PDCD6O75340 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.82□□□□□ -0.36
PDCD6O75340 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
PDCD6O75340 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
PDCD6O75340 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
PDCD6O75340 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PDCD6O75340 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
PDCD6O75340 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.81□□□□□ -0.36
PDCD6O75340 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.81□□□□□ -0.36
PDCD6O75340 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.81□□□□□ -0.36
PDCD6O75340 AC055811.4-201ENST00000624039 1754 ntBASIC12.81□□□□□ -0.36
PDCD6O75340 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PDCD6O75340 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PDCD6O75340 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
PDCD6O75340 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
PDCD6O75340 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
PDCD6O75340 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PDCD6O75340 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.81□□□□□ -0.36
PDCD6O75340 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
PDCD6O75340 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
PDCD6O75340 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PDCD6O75340 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.81□□□□□ -0.36
PDCD6O75340 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.81□□□□□ -0.36
PDCD6O75340 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.81□□□□□ -0.36
PDCD6O75340 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
PDCD6O75340 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.81□□□□□ -0.36
PDCD6O75340 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PDCD6O75340 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
PDCD6O75340 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PDCD6O75340 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
PDCD6O75340 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.81□□□□□ -0.36
PDCD6O75340 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.81□□□□□ -0.36
PDCD6O75340 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
PDCD6O75340 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PDCD6O75340 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PDCD6O75340 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.81□□□□□ -0.36
PDCD6O75340 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.81□□□□□ -0.36
PDCD6O75340 KRT18P13-201ENST00000400056 1290 ntBASIC12.81□□□□□ -0.36
PDCD6O75340 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PDCD6O75340 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PDCD6O75340 DNAJB3-202ENST00000449667 1266 ntBASIC12.81□□□□□ -0.36
PDCD6O75340 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.81□□□□□ -0.36
PDCD6O75340 MEIS3P1-201ENST00000495167 958 ntBASIC12.81□□□□□ -0.36
PDCD6O75340 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.81□□□□□ -0.36
PDCD6O75340 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PDCD6O75340 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC12.81□□□□□ -0.36
PDCD6O75340 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.81□□□□□ -0.36
PDCD6O75340 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PDCD6O75340 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PDCD6O75340 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PDCD6O75340 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PDCD6O75340 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
PDCD6O75340 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PDCD6O75340 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PDCD6O75340 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PDCD6O75340 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PDCD6O75340 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PDCD6O75340 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PDCD6O75340 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
PDCD6O75340 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PDCD6O75340 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PDCD6O75340 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PDCD6O75340 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PDCD6O75340 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.81□□□□□ -0.36
PDCD6O75340 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
PDCD6O75340 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.81□□□□□ -0.36
PDCD6O75340 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
PDCD6O75340 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PDCD6O75340 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
PDCD6O75340 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
PDCD6O75340 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.8□□□□□ -0.36
PDCD6O75340 AC100757.3-201ENST00000622361 1406 ntBASIC12.8□□□□□ -0.36
PDCD6O75340 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.8□□□□□ -0.36
PDCD6O75340 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PDCD6O75340 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.8□□□□□ -0.36
PDCD6O75340 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
PDCD6O75340 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
PDCD6O75340 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PDCD6O75340 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.8□□□□□ -0.36
PDCD6O75340 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PDCD6O75340 BTBD7P1-201ENST00000447253 1453 ntBASIC12.8□□□□□ -0.36
PDCD6O75340 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.8□□□□□ -0.36
PDCD6O75340 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
PDCD6O75340 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
PDCD6O75340 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.8□□□□□ -0.36
PDCD6O75340 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
PDCD6O75340 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
PDCD6O75340 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
PDCD6O75340 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PDCD6O75340 AL645937.2-201ENST00000396808 931 ntBASIC12.8□□□□□ -0.36
PDCD6O75340 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms