Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.29■□□□□ 0.04
PRAMEF11O60813 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.29■□□□□ 0.04
PRAMEF11O60813 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF11O60813 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF11O60813 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF11O60813 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
PRAMEF11O60813 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF11O60813 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PRAMEF11O60813 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
PRAMEF11O60813 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PRAMEF11O60813 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF11O60813 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF11O60813 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF11O60813 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF11O60813 SALL4P5-201ENST00000419001 1760 ntBASIC15.29■□□□□ 0.04
PRAMEF11O60813 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.29■□□□□ 0.04
PRAMEF11O60813 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.28■□□□□ 0.04
PRAMEF11O60813 AC011840.2-201ENST00000563063 1520 ntBASIC15.28■□□□□ 0.04
PRAMEF11O60813 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PRAMEF11O60813 AP000593.2-201ENST00000542775 1433 ntBASIC15.28■□□□□ 0.04
PRAMEF11O60813 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PRAMEF11O60813 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF11O60813 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF11O60813 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF11O60813 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.28■□□□□ 0.04
PRAMEF11O60813 CICP24-201ENST00000605464 2705 ntBASIC15.28■□□□□ 0.04
PRAMEF11O60813 CICP14-201ENST00000629111 2732 ntBASIC15.28■□□□□ 0.04
PRAMEF11O60813 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
PRAMEF11O60813 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PRAMEF11O60813 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF11O60813 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.28■□□□□ 0.04
PRAMEF11O60813 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF11O60813 GK-202ENST00000378941 458 ntTSL 3 BASIC15.28■□□□□ 0.04
PRAMEF11O60813 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF11O60813 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF11O60813 MIR1202-201ENST00000408529 83 ntBASIC15.28■□□□□ 0.04
PRAMEF11O60813 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PRAMEF11O60813 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.28■□□□□ 0.04
PRAMEF11O60813 AC026954.1-201ENST00000429771 1293 ntBASIC15.28■□□□□ 0.04
PRAMEF11O60813 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.28■□□□□ 0.04
PRAMEF11O60813 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.28■□□□□ 0.04
PRAMEF11O60813 AP003171.2-201ENST00000528208 925 ntBASIC15.28■□□□□ 0.04
PRAMEF11O60813 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
PRAMEF11O60813 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.28■□□□□ 0.04
PRAMEF11O60813 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.28■□□□□ 0.04
PRAMEF11O60813 AP005482.1-201ENST00000563722 1273 ntBASIC15.28■□□□□ 0.04
PRAMEF11O60813 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.28■□□□□ 0.04
PRAMEF11O60813 MIR6805-201ENST00000615055 62 ntBASIC15.28■□□□□ 0.04
PRAMEF11O60813 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.28■□□□□ 0.04
PRAMEF11O60813 AC018529.2-202ENST00000611482 3087 ntBASIC15.28■□□□□ 0.04
PRAMEF11O60813 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.28■□□□□ 0.04
PRAMEF11O60813 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF11O60813 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF11O60813 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF11O60813 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF11O60813 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.28■□□□□ 0.04
PRAMEF11O60813 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.28■□□□□ 0.04
PRAMEF11O60813 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF11O60813 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF11O60813 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.28■□□□□ 0.04
PRAMEF11O60813 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.28■□□□□ 0.04
PRAMEF11O60813 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.28■□□□□ 0.04
PRAMEF11O60813 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF11O60813 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF11O60813 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF11O60813 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.28■□□□□ 0.04
PRAMEF11O60813 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.28■□□□□ 0.04
PRAMEF11O60813 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF11O60813 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PRAMEF11O60813 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF11O60813 AL354989.2-201ENST00000435838 1540 ntBASIC15.27■□□□□ 0.04
PRAMEF11O60813 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.27■□□□□ 0.04
PRAMEF11O60813 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEF11O60813 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEF11O60813 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.27■□□□□ 0.04
PRAMEF11O60813 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEF11O60813 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.27■□□□□ 0.04
PRAMEF11O60813 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
PRAMEF11O60813 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
PRAMEF11O60813 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.27■□□□□ 0.04
PRAMEF11O60813 INE2-201ENST00000630399 1874 ntBASIC15.27■□□□□ 0.04
PRAMEF11O60813 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEF11O60813 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
PRAMEF11O60813 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.27■□□□□ 0.04
PRAMEF11O60813 AHCYP2-201ENST00000430630 1300 ntBASIC15.27■□□□□ 0.04
PRAMEF11O60813 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.27■□□□□ 0.04
PRAMEF11O60813 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEF11O60813 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PRAMEF11O60813 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEF11O60813 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEF11O60813 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEF11O60813 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEF11O60813 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PRAMEF11O60813 ATP5G2P4-201ENST00000442175 420 ntBASIC15.27■□□□□ 0.04
PRAMEF11O60813 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.27■□□□□ 0.04
PRAMEF11O60813 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
PRAMEF11O60813 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.27■□□□□ 0.04
PRAMEF11O60813 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.27■□□□□ 0.04
PRAMEF11O60813 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.27■□□□□ 0.04
PRAMEF11O60813 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms