Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC11.78□□□□□ -0.52
PDE6DO43924 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
PDE6DO43924 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
PDE6DO43924 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PDE6DO43924 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PDE6DO43924 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
PDE6DO43924 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
PDE6DO43924 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PDE6DO43924 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
PDE6DO43924 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PDE6DO43924 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PDE6DO43924 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC11.78□□□□□ -0.52
PDE6DO43924 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PDE6DO43924 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC11.78□□□□□ -0.52
PDE6DO43924 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC11.78□□□□□ -0.52
PDE6DO43924 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
PDE6DO43924 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
PDE6DO43924 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
PDE6DO43924 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
PDE6DO43924 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
PDE6DO43924 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC11.77□□□□□ -0.52
PDE6DO43924 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
PDE6DO43924 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
PDE6DO43924 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
PDE6DO43924 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
PDE6DO43924 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
PDE6DO43924 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
PDE6DO43924 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC11.77□□□□□ -0.52
PDE6DO43924 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
PDE6DO43924 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
PDE6DO43924 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC11.77□□□□□ -0.52
PDE6DO43924 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC11.77□□□□□ -0.53
PDE6DO43924 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PDE6DO43924 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
PDE6DO43924 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
PDE6DO43924 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
PDE6DO43924 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
PDE6DO43924 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
PDE6DO43924 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PDE6DO43924 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PDE6DO43924 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
PDE6DO43924 AC104457.1-201ENST00000401024 814 ntBASIC11.77□□□□□ -0.53
PDE6DO43924 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC11.77□□□□□ -0.53
PDE6DO43924 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
PDE6DO43924 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC11.77□□□□□ -0.53
PDE6DO43924 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC11.77□□□□□ -0.53
PDE6DO43924 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC11.77□□□□□ -0.53
PDE6DO43924 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC11.77□□□□□ -0.53
PDE6DO43924 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
PDE6DO43924 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
PDE6DO43924 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
PDE6DO43924 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
PDE6DO43924 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
PDE6DO43924 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC11.77□□□□□ -0.53
PDE6DO43924 CD63-210ENST00000550776 870 ntTSL 5 BASIC11.77□□□□□ -0.53
PDE6DO43924 AC105339.3-201ENST00000560043 636 ntBASIC11.77□□□□□ -0.53
PDE6DO43924 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC11.77□□□□□ -0.53
PDE6DO43924 MIR4751-201ENST00000578027 74 ntBASIC11.77□□□□□ -0.53
PDE6DO43924 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC11.77□□□□□ -0.53
PDE6DO43924 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC11.77□□□□□ -0.53
PDE6DO43924 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC11.77□□□□□ -0.53
PDE6DO43924 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC11.77□□□□□ -0.53
PDE6DO43924 AC008735.5-201ENST00000623544 497 ntBASIC11.77□□□□□ -0.53
PDE6DO43924 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC11.77□□□□□ -0.53
PDE6DO43924 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC11.77□□□□□ -0.53
PDE6DO43924 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC11.77□□□□□ -0.53
PDE6DO43924 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC11.77□□□□□ -0.53
PDE6DO43924 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
PDE6DO43924 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PDE6DO43924 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PDE6DO43924 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
PDE6DO43924 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PDE6DO43924 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC11.77□□□□□ -0.53
PDE6DO43924 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC11.77□□□□□ -0.53
PDE6DO43924 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
PDE6DO43924 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
PDE6DO43924 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
PDE6DO43924 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
PDE6DO43924 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
PDE6DO43924 LILRP1-201ENST00000444199 1370 ntBASIC11.77□□□□□ -0.53
PDE6DO43924 AC018665.1-201ENST00000622927 1362 ntBASIC11.77□□□□□ -0.53
PDE6DO43924 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
PDE6DO43924 CETP-203ENST00000566128 1733 ntTSL 5 BASIC11.77□□□□□ -0.53
PDE6DO43924 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
PDE6DO43924 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
PDE6DO43924 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PDE6DO43924 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
PDE6DO43924 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PDE6DO43924 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
PDE6DO43924 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
PDE6DO43924 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
PDE6DO43924 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PDE6DO43924 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
PDE6DO43924 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
PDE6DO43924 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
PDE6DO43924 FP325330.2-201ENST00000624219 5630 ntBASIC11.76□□□□□ -0.53
PDE6DO43924 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
PDE6DO43924 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
PDE6DO43924 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
PDE6DO43924 SON-203ENST00000381679 7860 ntTSL 5 BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms