Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.67□□□□□ -0.06
SLC28A2O43868 AL355864.2-201ENST00000447420 863 ntBASIC14.67□□□□□ -0.06
SLC28A2O43868 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC28A2O43868 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.67□□□□□ -0.06
SLC28A2O43868 AP001889.1-201ENST00000525414 633 ntBASIC14.67□□□□□ -0.06
SLC28A2O43868 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.67□□□□□ -0.06
SLC28A2O43868 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.67□□□□□ -0.06
SLC28A2O43868 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.67□□□□□ -0.06
SLC28A2O43868 AC079316.1-201ENST00000548397 411 ntBASIC14.67□□□□□ -0.06
SLC28A2O43868 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC28A2O43868 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.67□□□□□ -0.06
SLC28A2O43868 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC28A2O43868 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC28A2O43868 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC28A2O43868 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC28A2O43868 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SLC28A2O43868 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
SLC28A2O43868 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SLC28A2O43868 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SLC28A2O43868 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC28A2O43868 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
SLC28A2O43868 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SLC28A2O43868 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC28A2O43868 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.67□□□□□ -0.06
SLC28A2O43868 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC28A2O43868 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SLC28A2O43868 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC28A2O43868 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC28A2O43868 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC28A2O43868 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC28A2O43868 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC28A2O43868 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC28A2O43868 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.66□□□□□ -0.06
SLC28A2O43868 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SLC28A2O43868 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.66□□□□□ -0.06
SLC28A2O43868 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC28A2O43868 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC28A2O43868 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.66□□□□□ -0.06
SLC28A2O43868 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
SLC28A2O43868 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC28A2O43868 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.66□□□□□ -0.06
SLC28A2O43868 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC28A2O43868 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC28A2O43868 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC28A2O43868 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC28A2O43868 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC28A2O43868 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC28A2O43868 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC28A2O43868 AC023024.2-201ENST00000623561 1993 ntBASIC14.66□□□□□ -0.06
SLC28A2O43868 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC28A2O43868 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC28A2O43868 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC28A2O43868 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC28A2O43868 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC28A2O43868 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC28A2O43868 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC28A2O43868 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC28A2O43868 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC28A2O43868 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC28A2O43868 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.66□□□□□ -0.06
SLC28A2O43868 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.66□□□□□ -0.06
SLC28A2O43868 PTP4A1P2-201ENST00000546033 454 ntBASIC14.66□□□□□ -0.06
SLC28A2O43868 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.66□□□□□ -0.06
SLC28A2O43868 MIR4722-201ENST00000578292 60 ntBASIC14.66□□□□□ -0.06
SLC28A2O43868 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.66□□□□□ -0.06
SLC28A2O43868 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.66□□□□□ -0.06
SLC28A2O43868 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.66□□□□□ -0.06
SLC28A2O43868 AC074044.1-201ENST00000609673 707 ntBASIC14.66□□□□□ -0.06
SLC28A2O43868 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.66□□□□□ -0.06
SLC28A2O43868 AC244452.3-201ENST00000636814 210 ntBASIC14.66□□□□□ -0.06
SLC28A2O43868 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SLC28A2O43868 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.66□□□□□ -0.06
SLC28A2O43868 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.66□□□□□ -0.06
SLC28A2O43868 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC28A2O43868 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC28A2O43868 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.66□□□□□ -0.06
SLC28A2O43868 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC28A2O43868 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC28A2O43868 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SLC28A2O43868 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC28A2O43868 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC28A2O43868 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC28A2O43868 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.65□□□□□ -0.06
SLC28A2O43868 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
SLC28A2O43868 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC28A2O43868 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SLC28A2O43868 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC28A2O43868 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC28A2O43868 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
SLC28A2O43868 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.65□□□□□ -0.06
SLC28A2O43868 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.65□□□□□ -0.06
SLC28A2O43868 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC28A2O43868 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
SLC28A2O43868 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SLC28A2O43868 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC28A2O43868 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.65□□□□□ -0.06
SLC28A2O43868 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.65□□□□□ -0.06
SLC28A2O43868 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SLC28A2O43868 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC28A2O43868 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms