Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 AC027307.3-201ENST00000594262 1100 ntBASIC13.5□□□□□ -0.25
TRAF3IP2O43734 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 SBF1P1-201ENST00000444527 5631 ntBASIC13.49□□□□□ -0.25
TRAF3IP2O43734 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 KRT8P35-201ENST00000483942 1338 ntBASIC13.49□□□□□ -0.25
TRAF3IP2O43734 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 AC010319.3-201ENST00000597028 470 ntBASIC13.49□□□□□ -0.25
TRAF3IP2O43734 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 AL603764.1-201ENST00000636452 321 ntBASIC13.49□□□□□ -0.25
TRAF3IP2O43734 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 MSTO2P-201ENST00000314835 1709 ntBASIC13.49□□□□□ -0.25
TRAF3IP2O43734 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 AL390755.1-201ENST00000623716 2027 ntBASIC13.49□□□□□ -0.25
TRAF3IP2O43734 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
TRAF3IP2O43734 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 AC055811.4-201ENST00000624039 1754 ntBASIC13.48□□□□□ -0.25
TRAF3IP2O43734 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms