Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
ACTN4O43707 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ACTN4O43707 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.97■□□□□ 0.31
ACTN4O43707 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.97■□□□□ 0.31
ACTN4O43707 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.97■□□□□ 0.31
ACTN4O43707 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ACTN4O43707 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ACTN4O43707 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ACTN4O43707 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
ACTN4O43707 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ACTN4O43707 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ACTN4O43707 NUS1P3-201ENST00000423502 862 ntBASIC16.97■□□□□ 0.31
ACTN4O43707 AC134915.1-201ENST00000426461 574 ntBASIC16.97■□□□□ 0.31
ACTN4O43707 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.97■□□□□ 0.31
ACTN4O43707 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.97■□□□□ 0.31
ACTN4O43707 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.97■□□□□ 0.31
ACTN4O43707 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.97■□□□□ 0.31
ACTN4O43707 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.97■□□□□ 0.31
ACTN4O43707 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.97■□□□□ 0.31
ACTN4O43707 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
ACTN4O43707 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.97■□□□□ 0.31
ACTN4O43707 GPALPP1-207ENST00000611650 899 ntBASIC16.97■□□□□ 0.31
ACTN4O43707 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.97■□□□□ 0.31
ACTN4O43707 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.97■□□□□ 0.31
ACTN4O43707 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
ACTN4O43707 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.97■□□□□ 0.31
ACTN4O43707 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ACTN4O43707 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ACTN4O43707 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
ACTN4O43707 HSPA7-201ENST00000445535 1927 ntBASIC16.97■□□□□ 0.31
ACTN4O43707 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.97■□□□□ 0.31
ACTN4O43707 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.97■□□□□ 0.31
ACTN4O43707 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.97■□□□□ 0.31
ACTN4O43707 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.97■□□□□ 0.31
ACTN4O43707 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.97■□□□□ 0.31
ACTN4O43707 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ACTN4O43707 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
ACTN4O43707 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
ACTN4O43707 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ACTN4O43707 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.96■□□□□ 0.31
ACTN4O43707 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ACTN4O43707 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ACTN4O43707 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
ACTN4O43707 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.96■□□□□ 0.31
ACTN4O43707 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ACTN4O43707 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ACTN4O43707 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ACTN4O43707 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ACTN4O43707 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ACTN4O43707 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ACTN4O43707 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ACTN4O43707 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ACTN4O43707 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ACTN4O43707 C1QBPP1-201ENST00000400117 770 ntBASIC16.96■□□□□ 0.31
ACTN4O43707 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.96■□□□□ 0.31
ACTN4O43707 AL442647.2-201ENST00000429864 857 ntBASIC16.96■□□□□ 0.31
ACTN4O43707 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ACTN4O43707 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
ACTN4O43707 SERBP1P5-201ENST00000510079 1181 ntBASIC16.96■□□□□ 0.31
ACTN4O43707 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
ACTN4O43707 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.96■□□□□ 0.31
ACTN4O43707 AC092552.1-201ENST00000547243 906 ntBASIC16.96■□□□□ 0.31
ACTN4O43707 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.96■□□□□ 0.31
ACTN4O43707 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.96■□□□□ 0.31
ACTN4O43707 AL359711.2-201ENST00000563105 872 ntBASIC16.96■□□□□ 0.31
ACTN4O43707 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.96■□□□□ 0.31
ACTN4O43707 RN7SL275P-201ENST00000582762 335 ntBASIC16.96■□□□□ 0.31
ACTN4O43707 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ACTN4O43707 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.96■□□□□ 0.31
ACTN4O43707 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ACTN4O43707 AC093726.1-201ENST00000608064 963 ntBASIC16.96■□□□□ 0.31
ACTN4O43707 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.96■□□□□ 0.31
ACTN4O43707 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ACTN4O43707 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.96■□□□□ 0.31
ACTN4O43707 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ACTN4O43707 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ACTN4O43707 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ACTN4O43707 AC027601.5-201ENST00000624065 2482 ntBASIC16.96■□□□□ 0.31
ACTN4O43707 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ACTN4O43707 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ACTN4O43707 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ACTN4O43707 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ACTN4O43707 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ACTN4O43707 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ACTN4O43707 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ACTN4O43707 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ACTN4O43707 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.96■□□□□ 0.3
ACTN4O43707 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
ACTN4O43707 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ACTN4O43707 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ACTN4O43707 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ACTN4O43707 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ACTN4O43707 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.95■□□□□ 0.3
ACTN4O43707 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ACTN4O43707 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ACTN4O43707 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.95■□□□□ 0.3
ACTN4O43707 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.95■□□□□ 0.3
ACTN4O43707 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
ACTN4O43707 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ACTN4O43707 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms