Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
E2F3O00716 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
E2F3O00716 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
E2F3O00716 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
E2F3O00716 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
E2F3O00716 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
E2F3O00716 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
E2F3O00716 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
E2F3O00716 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
E2F3O00716 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
E2F3O00716 AC023090.2-201ENST00000625182 2110 ntBASIC14.78□□□□□ -0.04
E2F3O00716 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
E2F3O00716 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
E2F3O00716 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
E2F3O00716 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
E2F3O00716 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
E2F3O00716 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.78□□□□□ -0.04
E2F3O00716 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
E2F3O00716 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
E2F3O00716 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.78□□□□□ -0.04
E2F3O00716 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
E2F3O00716 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
E2F3O00716 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
E2F3O00716 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
E2F3O00716 SPDYE19P-201ENST00000338590 713 ntBASIC14.78□□□□□ -0.04
E2F3O00716 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.78□□□□□ -0.04
E2F3O00716 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
E2F3O00716 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.78□□□□□ -0.04
E2F3O00716 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
E2F3O00716 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
E2F3O00716 AP006294.1-201ENST00000415407 339 ntBASIC14.78□□□□□ -0.04
E2F3O00716 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
E2F3O00716 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
E2F3O00716 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.78□□□□□ -0.04
E2F3O00716 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.78□□□□□ -0.04
E2F3O00716 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.78□□□□□ -0.04
E2F3O00716 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.78□□□□□ -0.04
E2F3O00716 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.78□□□□□ -0.04
E2F3O00716 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.78□□□□□ -0.04
E2F3O00716 RRP7BP-205ENST00000566851 833 ntBASIC14.78□□□□□ -0.04
E2F3O00716 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.78□□□□□ -0.04
E2F3O00716 BRI3BPP1-201ENST00000594224 787 ntBASIC14.78□□□□□ -0.04
E2F3O00716 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.78□□□□□ -0.04
E2F3O00716 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
E2F3O00716 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
E2F3O00716 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.78□□□□□ -0.04
E2F3O00716 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
E2F3O00716 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
E2F3O00716 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
E2F3O00716 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
E2F3O00716 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.78□□□□□ -0.04
E2F3O00716 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.78□□□□□ -0.04
E2F3O00716 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
E2F3O00716 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.78□□□□□ -0.04
E2F3O00716 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.77□□□□□ -0.04
E2F3O00716 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
E2F3O00716 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
E2F3O00716 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
E2F3O00716 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
E2F3O00716 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
E2F3O00716 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
E2F3O00716 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
E2F3O00716 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
E2F3O00716 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.77□□□□□ -0.04
E2F3O00716 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
E2F3O00716 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
E2F3O00716 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
E2F3O00716 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
E2F3O00716 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.04
E2F3O00716 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
E2F3O00716 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
E2F3O00716 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.77□□□□□ -0.05
E2F3O00716 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
E2F3O00716 AC079776.1-201ENST00000401540 1152 ntBASIC14.77□□□□□ -0.05
E2F3O00716 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.77□□□□□ -0.05
E2F3O00716 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
E2F3O00716 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
E2F3O00716 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
E2F3O00716 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
E2F3O00716 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
E2F3O00716 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.77□□□□□ -0.05
E2F3O00716 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.77□□□□□ -0.05
E2F3O00716 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.77□□□□□ -0.05
E2F3O00716 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
E2F3O00716 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.77□□□□□ -0.05
E2F3O00716 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
E2F3O00716 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
E2F3O00716 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.77□□□□□ -0.05
E2F3O00716 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.77□□□□□ -0.05
E2F3O00716 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
E2F3O00716 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
E2F3O00716 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
E2F3O00716 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
E2F3O00716 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.77□□□□□ -0.05
E2F3O00716 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
E2F3O00716 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
E2F3O00716 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
E2F3O00716 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
E2F3O00716 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.77□□□□□ -0.05
E2F3O00716 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms