Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
CHL1O00533 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHL1O00533 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHL1O00533 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CHL1O00533 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHL1O00533 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHL1O00533 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC19.23■□□□□ 0.67
CHL1O00533 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHL1O00533 MRPL37P1-201ENST00000592451 1337 ntBASIC19.23■□□□□ 0.67
CHL1O00533 LTF-203ENST00000426532 2494 ntTSL 2 BASIC19.23■□□□□ 0.67
CHL1O00533 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHL1O00533 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHL1O00533 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHL1O00533 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC19.22■□□□□ 0.67
CHL1O00533 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHL1O00533 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC19.22■□□□□ 0.67
CHL1O00533 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHL1O00533 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHL1O00533 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHL1O00533 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHL1O00533 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC19.22■□□□□ 0.67
CHL1O00533 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHL1O00533 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHL1O00533 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.22■□□□□ 0.67
CHL1O00533 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHL1O00533 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC19.22■□□□□ 0.67
CHL1O00533 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHL1O00533 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC19.22■□□□□ 0.67
CHL1O00533 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHL1O00533 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CHL1O00533 PTPA-218ENST00000435132 618 ntTSL 2 BASIC19.22■□□□□ 0.67
CHL1O00533 AC022494.1-201ENST00000466044 728 ntBASIC19.22■□□□□ 0.67
CHL1O00533 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CHL1O00533 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC19.22■□□□□ 0.67
CHL1O00533 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC19.22■□□□□ 0.67
CHL1O00533 AC007663.3-201ENST00000609632 465 ntBASIC19.22■□□□□ 0.67
CHL1O00533 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC19.22■□□□□ 0.67
CHL1O00533 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHL1O00533 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHL1O00533 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHL1O00533 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CHL1O00533 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHL1O00533 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CHL1O00533 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHL1O00533 GRN-222ENST00000639447 1314 ntTSL 2 BASIC19.22■□□□□ 0.67
CHL1O00533 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CHL1O00533 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHL1O00533 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHL1O00533 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHL1O00533 FGD5P1-202ENST00000614866 2498 ntBASIC19.22■□□□□ 0.67
CHL1O00533 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHL1O00533 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHL1O00533 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHL1O00533 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHL1O00533 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHL1O00533 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHL1O00533 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHL1O00533 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHL1O00533 KRT8P13-201ENST00000463294 1010 ntBASIC19.21■□□□□ 0.67
CHL1O00533 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC19.21■□□□□ 0.67
CHL1O00533 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC19.21■□□□□ 0.67
CHL1O00533 HNRNPA1P36-201ENST00000521313 955 ntBASIC19.21■□□□□ 0.67
CHL1O00533 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC19.21■□□□□ 0.67
CHL1O00533 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC19.21■□□□□ 0.67
CHL1O00533 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHL1O00533 MIR3615-201ENST00000581999 87 ntBASIC19.21■□□□□ 0.67
CHL1O00533 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC19.21■□□□□ 0.67
CHL1O00533 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
CHL1O00533 KC6-205ENST00000599934 556 ntTSL 4 BASIC19.21■□□□□ 0.67
CHL1O00533 BNIP3P13-201ENST00000599968 566 ntBASIC19.21■□□□□ 0.67
CHL1O00533 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC19.21■□□□□ 0.67
CHL1O00533 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
CHL1O00533 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC19.21■□□□□ 0.67
CHL1O00533 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHL1O00533 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHL1O00533 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CHL1O00533 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHL1O00533 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC19.21■□□□□ 0.67
CHL1O00533 MX1-218ENST00000619682 1980 ntTSL 5 BASIC19.21■□□□□ 0.67
CHL1O00533 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC19.2■□□□□ 0.66
CHL1O00533 AC244394.1-201ENST00000435000 1665 ntBASIC19.2■□□□□ 0.66
CHL1O00533 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHL1O00533 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHL1O00533 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC19.2■□□□□ 0.66
CHL1O00533 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CHL1O00533 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CHL1O00533 KRT8P29-201ENST00000420409 1371 ntBASIC19.2■□□□□ 0.66
CHL1O00533 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHL1O00533 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHL1O00533 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHL1O00533 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHL1O00533 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHL1O00533 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CHL1O00533 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHL1O00533 AL590440.2-201ENST00000641973 1595 ntBASIC19.2■□□□□ 0.66
CHL1O00533 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CHL1O00533 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC19.2■□□□□ 0.66
CHL1O00533 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC19.2■□□□□ 0.66
CHL1O00533 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC19.2■□□□□ 0.66
CHL1O00533 OARD1-212ENST00000482515 832 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms