Protein–RNA interactions for Protein: O00221

NFKBIE, NF-kappa-B inhibitor epsilon, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIEO00221 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC17.8■□□□□ 0.44
NFKBIEO00221 AP000845.1-201ENST00000581677 2131 ntBASIC17.8■□□□□ 0.44
NFKBIEO00221 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
NFKBIEO00221 KRT8P28-201ENST00000433288 1390 ntBASIC17.79■□□□□ 0.44
NFKBIEO00221 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NFKBIEO00221 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC17.79■□□□□ 0.44
NFKBIEO00221 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
NFKBIEO00221 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NFKBIEO00221 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NFKBIEO00221 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NFKBIEO00221 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NFKBIEO00221 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NFKBIEO00221 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NFKBIEO00221 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
NFKBIEO00221 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
NFKBIEO00221 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NFKBIEO00221 CELP-201ENST00000411440 1249 ntTSL 5 BASIC17.79■□□□□ 0.44
NFKBIEO00221 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC17.79■□□□□ 0.44
NFKBIEO00221 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC17.79■□□□□ 0.44
NFKBIEO00221 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NFKBIEO00221 AC106047.2-201ENST00000511723 743 ntBASIC17.79■□□□□ 0.44
NFKBIEO00221 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC17.79■□□□□ 0.44
NFKBIEO00221 OR5BD1P-201ENST00000532527 817 ntBASIC17.79■□□□□ 0.44
NFKBIEO00221 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
NFKBIEO00221 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC17.79■□□□□ 0.44
NFKBIEO00221 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC17.79■□□□□ 0.44
NFKBIEO00221 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
NFKBIEO00221 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NFKBIEO00221 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC17.79■□□□□ 0.44
NFKBIEO00221 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NFKBIEO00221 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
NFKBIEO00221 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NFKBIEO00221 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NFKBIEO00221 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NFKBIEO00221 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
NFKBIEO00221 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NFKBIEO00221 AC006372.4-201ENST00000624122 1543 ntBASIC17.78■□□□□ 0.44
NFKBIEO00221 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
NFKBIEO00221 CTBP2P8-201ENST00000422584 1330 ntBASIC17.78■□□□□ 0.44
NFKBIEO00221 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NFKBIEO00221 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
NFKBIEO00221 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NFKBIEO00221 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.78■□□□□ 0.44
NFKBIEO00221 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC17.78■□□□□ 0.44
NFKBIEO00221 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
NFKBIEO00221 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NFKBIEO00221 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NFKBIEO00221 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
NFKBIEO00221 SURF4-203ENST00000371991 715 ntTSL 3 BASIC17.78■□□□□ 0.44
NFKBIEO00221 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NFKBIEO00221 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NFKBIEO00221 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC17.78■□□□□ 0.44
NFKBIEO00221 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
NFKBIEO00221 RGS5-216ENST00000449680 788 ntTSL 3 BASIC17.78■□□□□ 0.44
NFKBIEO00221 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NFKBIEO00221 TREHP1-201ENST00000531328 465 ntBASIC17.78■□□□□ 0.44
NFKBIEO00221 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC17.78■□□□□ 0.44
NFKBIEO00221 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
NFKBIEO00221 AP005212.2-201ENST00000584979 510 ntBASIC17.78■□□□□ 0.44
NFKBIEO00221 AC010632.2-201ENST00000588369 1224 ntBASIC17.78■□□□□ 0.44
NFKBIEO00221 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC17.78■□□□□ 0.44
NFKBIEO00221 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC17.78■□□□□ 0.44
NFKBIEO00221 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NFKBIEO00221 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC17.78■□□□□ 0.44
NFKBIEO00221 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC17.78■□□□□ 0.44
NFKBIEO00221 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.78■□□□□ 0.44
NFKBIEO00221 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
NFKBIEO00221 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
NFKBIEO00221 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NFKBIEO00221 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NFKBIEO00221 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
NFKBIEO00221 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NFKBIEO00221 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
NFKBIEO00221 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NFKBIEO00221 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NFKBIEO00221 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.77■□□□□ 0.44
NFKBIEO00221 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NFKBIEO00221 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NFKBIEO00221 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC17.77■□□□□ 0.44
NFKBIEO00221 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NFKBIEO00221 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC17.77■□□□□ 0.44
NFKBIEO00221 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NFKBIEO00221 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
NFKBIEO00221 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.77■□□□□ 0.44
NFKBIEO00221 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NFKBIEO00221 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC17.77■□□□□ 0.44
NFKBIEO00221 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NFKBIEO00221 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NFKBIEO00221 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NFKBIEO00221 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.77■□□□□ 0.44
NFKBIEO00221 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC17.77■□□□□ 0.44
NFKBIEO00221 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NFKBIEO00221 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
NFKBIEO00221 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
NFKBIEO00221 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NFKBIEO00221 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
NFKBIEO00221 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NFKBIEO00221 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
NFKBIEO00221 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC17.77■□□□□ 0.44
NFKBIEO00221 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms