Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 AC092135.3-201ENST00000624151 1846 ntBASIC13.34□□□□□ -0.27
NPIPB4C9JG80 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 GRK6P1-201ENST00000400595 1711 ntBASIC13.34□□□□□ -0.27
NPIPB4C9JG80 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 GCOM2-201ENST00000509133 1104 ntBASIC13.34□□□□□ -0.27
NPIPB4C9JG80 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
NPIPB4C9JG80 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
NPIPB4C9JG80 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
NPIPB4C9JG80 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
NPIPB4C9JG80 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 DGCR5-201ENST00000399539 862 ntBASIC13.33□□□□□ -0.28
NPIPB4C9JG80 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 AP006294.1-201ENST00000415407 339 ntBASIC13.33□□□□□ -0.28
NPIPB4C9JG80 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 AC068587.3-201ENST00000526613 355 ntBASIC13.33□□□□□ -0.28
NPIPB4C9JG80 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 AC138761.1-201ENST00000584393 385 ntBASIC13.33□□□□□ -0.28
NPIPB4C9JG80 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 MIR6074-201ENST00000612054 107 ntBASIC13.33□□□□□ -0.28
NPIPB4C9JG80 RPSAP52-203ENST00000622976 1023 ntBASIC13.33□□□□□ -0.28
NPIPB4C9JG80 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 AP001267.2-201ENST00000532619 2086 ntBASIC13.33□□□□□ -0.28
NPIPB4C9JG80 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
NPIPB4C9JG80 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms