Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PLEKHD1A6NEE1 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PLEKHD1A6NEE1 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
PLEKHD1A6NEE1 HIST2H2BA-201ENST00000412169 381 ntBASIC22.84■■□□□ 1.25
PLEKHD1A6NEE1 RHEB-207ENST00000496004 744 ntTSL 2 BASIC22.84■■□□□ 1.25
PLEKHD1A6NEE1 ORAOV1P1-201ENST00000503108 395 ntBASIC22.84■■□□□ 1.25
PLEKHD1A6NEE1 AP003398.1-201ENST00000531124 318 ntBASIC22.84■■□□□ 1.25
PLEKHD1A6NEE1 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC22.84■■□□□ 1.25
PLEKHD1A6NEE1 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
PLEKHD1A6NEE1 AC005357.2-202ENST00000590507 1060 ntBASIC22.84■■□□□ 1.25
PLEKHD1A6NEE1 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
PLEKHD1A6NEE1 AC107464.3-201ENST00000609172 737 ntBASIC22.84■■□□□ 1.25
PLEKHD1A6NEE1 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC22.84■■□□□ 1.25
PLEKHD1A6NEE1 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC22.84■■□□□ 1.25
PLEKHD1A6NEE1 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PLEKHD1A6NEE1 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
PLEKHD1A6NEE1 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC22.84■■□□□ 1.25
PLEKHD1A6NEE1 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PLEKHD1A6NEE1 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PLEKHD1A6NEE1 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC22.84■■□□□ 1.25
PLEKHD1A6NEE1 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PLEKHD1A6NEE1 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PLEKHD1A6NEE1 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PLEKHD1A6NEE1 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
PLEKHD1A6NEE1 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
PLEKHD1A6NEE1 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
PLEKHD1A6NEE1 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
PLEKHD1A6NEE1 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC22.83■■□□□ 1.25
PLEKHD1A6NEE1 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PLEKHD1A6NEE1 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PLEKHD1A6NEE1 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC22.83■■□□□ 1.25
PLEKHD1A6NEE1 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PLEKHD1A6NEE1 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC22.83■■□□□ 1.25
PLEKHD1A6NEE1 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
PLEKHD1A6NEE1 AC073911.3-201ENST00000624401 631 ntBASIC22.83■■□□□ 1.25
PLEKHD1A6NEE1 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
PLEKHD1A6NEE1 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC22.83■■□□□ 1.25
PLEKHD1A6NEE1 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC22.83■■□□□ 1.25
PLEKHD1A6NEE1 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC22.83■■□□□ 1.25
PLEKHD1A6NEE1 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.24
PLEKHD1A6NEE1 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
PLEKHD1A6NEE1 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
PLEKHD1A6NEE1 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.24
PLEKHD1A6NEE1 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC22.83■■□□□ 1.24
PLEKHD1A6NEE1 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC22.83■■□□□ 1.24
PLEKHD1A6NEE1 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.24
PLEKHD1A6NEE1 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PLEKHD1A6NEE1 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PLEKHD1A6NEE1 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PLEKHD1A6NEE1 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC22.82■■□□□ 1.24
PLEKHD1A6NEE1 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC22.82■■□□□ 1.24
PLEKHD1A6NEE1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC22.82■■□□□ 1.24
PLEKHD1A6NEE1 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC22.82■■□□□ 1.24
PLEKHD1A6NEE1 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PLEKHD1A6NEE1 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PLEKHD1A6NEE1 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PLEKHD1A6NEE1 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PLEKHD1A6NEE1 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PLEKHD1A6NEE1 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PLEKHD1A6NEE1 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC22.82■■□□□ 1.24
PLEKHD1A6NEE1 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
PLEKHD1A6NEE1 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC22.82■■□□□ 1.24
PLEKHD1A6NEE1 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC22.82■■□□□ 1.24
PLEKHD1A6NEE1 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC22.82■■□□□ 1.24
PLEKHD1A6NEE1 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PLEKHD1A6NEE1 OR2R1P-201ENST00000441404 914 ntBASIC22.82■■□□□ 1.24
PLEKHD1A6NEE1 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC22.82■■□□□ 1.24
PLEKHD1A6NEE1 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PLEKHD1A6NEE1 POLD4-208ENST00000532830 904 ntTSL 3 BASIC22.82■■□□□ 1.24
PLEKHD1A6NEE1 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC22.82■■□□□ 1.24
PLEKHD1A6NEE1 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC22.82■■□□□ 1.24
PLEKHD1A6NEE1 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PLEKHD1A6NEE1 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
PLEKHD1A6NEE1 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PLEKHD1A6NEE1 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PLEKHD1A6NEE1 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PLEKHD1A6NEE1 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
PLEKHD1A6NEE1 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PLEKHD1A6NEE1 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PLEKHD1A6NEE1 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
PLEKHD1A6NEE1 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PLEKHD1A6NEE1 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PLEKHD1A6NEE1 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
PLEKHD1A6NEE1 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PLEKHD1A6NEE1 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC22.81■■□□□ 1.24
PLEKHD1A6NEE1 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC22.81■■□□□ 1.24
PLEKHD1A6NEE1 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PLEKHD1A6NEE1 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC22.81■■□□□ 1.24
PLEKHD1A6NEE1 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
PLEKHD1A6NEE1 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC22.81■■□□□ 1.24
PLEKHD1A6NEE1 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PLEKHD1A6NEE1 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PLEKHD1A6NEE1 MIR1227-201ENST00000408484 88 ntBASIC22.81■■□□□ 1.24
PLEKHD1A6NEE1 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC22.81■■□□□ 1.24
PLEKHD1A6NEE1 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC22.81■■□□□ 1.24
PLEKHD1A6NEE1 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC22.81■■□□□ 1.24
PLEKHD1A6NEE1 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PLEKHD1A6NEE1 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC22.81■■□□□ 1.24
PLEKHD1A6NEE1 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PLEKHD1A6NEE1 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC22.81■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms