Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC66A2RUB6 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC66A2RUB6 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC66A2RUB6 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC66A2RUB6 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC66A2RUB6 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CCDC66A2RUB6 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC66A2RUB6 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC66A2RUB6 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC66A2RUB6 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC66A2RUB6 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC66A2RUB6 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC66A2RUB6 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CCDC66A2RUB6 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC66A2RUB6 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC66A2RUB6 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.52■□□□□ 0.24
CCDC66A2RUB6 AL592309.1-201ENST00000443127 649 ntBASIC16.52■□□□□ 0.24
CCDC66A2RUB6 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC66A2RUB6 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC66A2RUB6 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.52■□□□□ 0.24
CCDC66A2RUB6 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.52■□□□□ 0.24
CCDC66A2RUB6 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC66A2RUB6 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.52■□□□□ 0.24
CCDC66A2RUB6 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CCDC66A2RUB6 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
CCDC66A2RUB6 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC66A2RUB6 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC66A2RUB6 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC16.52■□□□□ 0.23
CCDC66A2RUB6 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.52■□□□□ 0.23
CCDC66A2RUB6 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC66A2RUB6 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
CCDC66A2RUB6 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC66A2RUB6 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC66A2RUB6 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC66A2RUB6 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
CCDC66A2RUB6 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 AL607033.1-201ENST00000623900 1599 ntBASIC16.51■□□□□ 0.23
CCDC66A2RUB6 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 AZGP1P1-201ENST00000411909 902 ntBASIC16.51■□□□□ 0.23
CCDC66A2RUB6 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 PGAM5P1-201ENST00000518923 814 ntBASIC16.51■□□□□ 0.23
CCDC66A2RUB6 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 CICP11-201ENST00000434745 2827 ntBASIC16.51■□□□□ 0.23
CCDC66A2RUB6 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CCDC66A2RUB6 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.5■□□□□ 0.23
CCDC66A2RUB6 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms