Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 TSPAN9-201ENST00000011898 4323 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 CLEC4F-201ENST00000272367 2475 ntAPPRIS P3 TSL 2 BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 RGL4-209ENST00000612432 2649 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 AL353593.2-201ENST00000602529 1483 ntBASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 REXO1L4P-201ENST00000605109 1937 ntBASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 AL359510.2-201ENST00000624958 2249 ntBASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 TMEM199-201ENST00000292114 3148 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 MAP7-208ENST00000617204 4536 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 VAV1-207ENST00000599806 2717 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 GALNT15-203ENST00000437509 2416 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 SLC16A7-203ENST00000547379 1969 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 SEPT10-202ENST00000397712 3071 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 PLAU-201ENST00000372764 2321 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 KRT17P7-202ENST00000582261 2334 ntTSL 5 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 AC012617.1-204ENST00000586340 2305 ntBASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 CYP4F12-215ENST00000550308 2044 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 AC010997.4-201ENST00000609200 1890 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 CCDC144A-204ENST00000360524 5830 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 DDT-203ENST00000403754 569 ntTSL 3 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 DDT-206ENST00000430101 573 ntTSL 2 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 APTR-203ENST00000430801 583 ntTSL 5 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 AC091305.1-201ENST00000479476 895 ntBASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 SP2-202ENST00000613139 908 ntTSL 5 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 LINC00523-206ENST00000556697 2071 ntTSL 2 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 NFATC4-209ENST00000553879 2707 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 CHGB-201ENST00000378961 2550 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 ARHGAP24-203ENST00000395184 4661 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 MCU-204ENST00000536019 3224 ntTSL 2 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 HDAC2-205ENST00000519065 9874 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 FAM198B-207ENST00000592057 3425 ntTSL 2 BASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms