Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.27■□□□□ 0.36
CLIC4Q9Y696 DUX4L47-201ENST00000566374 394 ntBASIC17.27■□□□□ 0.36
CLIC4Q9Y696 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.27■□□□□ 0.36
CLIC4Q9Y696 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.27■□□□□ 0.36
CLIC4Q9Y696 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
CLIC4Q9Y696 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.27■□□□□ 0.35
CLIC4Q9Y696 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.27■□□□□ 0.35
CLIC4Q9Y696 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLIC4Q9Y696 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.27■□□□□ 0.35
CLIC4Q9Y696 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CLIC4Q9Y696 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
CLIC4Q9Y696 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
CLIC4Q9Y696 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
CLIC4Q9Y696 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLIC4Q9Y696 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC17.27■□□□□ 0.35
CLIC4Q9Y696 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLIC4Q9Y696 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLIC4Q9Y696 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC17.26■□□□□ 0.35
CLIC4Q9Y696 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC17.26■□□□□ 0.35
CLIC4Q9Y696 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC17.26■□□□□ 0.35
CLIC4Q9Y696 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.26■□□□□ 0.35
CLIC4Q9Y696 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLIC4Q9Y696 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC17.26■□□□□ 0.35
CLIC4Q9Y696 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLIC4Q9Y696 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.26■□□□□ 0.35
CLIC4Q9Y696 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.26■□□□□ 0.35
CLIC4Q9Y696 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CLIC4Q9Y696 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.26■□□□□ 0.35
CLIC4Q9Y696 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLIC4Q9Y696 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.26■□□□□ 0.35
CLIC4Q9Y696 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.26■□□□□ 0.35
CLIC4Q9Y696 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.26■□□□□ 0.35
CLIC4Q9Y696 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.26■□□□□ 0.35
CLIC4Q9Y696 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.26■□□□□ 0.35
CLIC4Q9Y696 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.26■□□□□ 0.35
CLIC4Q9Y696 AC123567.1-201ENST00000548294 1261 ntBASIC17.26■□□□□ 0.35
CLIC4Q9Y696 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.26■□□□□ 0.35
CLIC4Q9Y696 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.26■□□□□ 0.35
CLIC4Q9Y696 AC093726.1-201ENST00000608064 963 ntBASIC17.26■□□□□ 0.35
CLIC4Q9Y696 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLIC4Q9Y696 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
CLIC4Q9Y696 AC008761.3-201ENST00000624803 892 ntBASIC17.26■□□□□ 0.35
CLIC4Q9Y696 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLIC4Q9Y696 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.26■□□□□ 0.35
CLIC4Q9Y696 AC015802.1-201ENST00000588104 1449 ntBASIC17.26■□□□□ 0.35
CLIC4Q9Y696 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLIC4Q9Y696 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLIC4Q9Y696 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLIC4Q9Y696 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLIC4Q9Y696 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLIC4Q9Y696 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLIC4Q9Y696 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CLIC4Q9Y696 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CLIC4Q9Y696 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLIC4Q9Y696 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLIC4Q9Y696 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLIC4Q9Y696 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC17.26■□□□□ 0.35
CLIC4Q9Y696 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLIC4Q9Y696 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLIC4Q9Y696 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLIC4Q9Y696 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.25■□□□□ 0.35
CLIC4Q9Y696 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.25■□□□□ 0.35
CLIC4Q9Y696 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLIC4Q9Y696 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CLIC4Q9Y696 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLIC4Q9Y696 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CLIC4Q9Y696 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLIC4Q9Y696 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CLIC4Q9Y696 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLIC4Q9Y696 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLIC4Q9Y696 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLIC4Q9Y696 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLIC4Q9Y696 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CLIC4Q9Y696 NUS1P3-201ENST00000423502 862 ntBASIC17.25■□□□□ 0.35
CLIC4Q9Y696 AC026434.2-201ENST00000506094 1078 ntBASIC17.25■□□□□ 0.35
CLIC4Q9Y696 AC104596.2-201ENST00000512793 793 ntBASIC17.25■□□□□ 0.35
CLIC4Q9Y696 AC027796.2-201ENST00000575326 344 ntBASIC17.25■□□□□ 0.35
CLIC4Q9Y696 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.25■□□□□ 0.35
CLIC4Q9Y696 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.25■□□□□ 0.35
CLIC4Q9Y696 AC009118.2-201ENST00000613275 655 ntBASIC17.25■□□□□ 0.35
CLIC4Q9Y696 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLIC4Q9Y696 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLIC4Q9Y696 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLIC4Q9Y696 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.25■□□□□ 0.35
CLIC4Q9Y696 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.25■□□□□ 0.35
CLIC4Q9Y696 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLIC4Q9Y696 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.25■□□□□ 0.35
CLIC4Q9Y696 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CLIC4Q9Y696 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CLIC4Q9Y696 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLIC4Q9Y696 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLIC4Q9Y696 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.24■□□□□ 0.35
CLIC4Q9Y696 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.24■□□□□ 0.35
CLIC4Q9Y696 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.24■□□□□ 0.35
CLIC4Q9Y696 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
CLIC4Q9Y696 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLIC4Q9Y696 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLIC4Q9Y696 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC17.24■□□□□ 0.35
CLIC4Q9Y696 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC17.24■□□□□ 0.35
CLIC4Q9Y696 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms