Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 SOCS2P1-201ENST00000417727 557 ntBASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 AP000812.2-201ENST00000538934 718 ntBASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 ENPP7P5-201ENST00000541031 1031 ntBASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 AC120045.2-201ENST00000567334 178 ntBASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 AC243960.2-201ENST00000600996 747 ntBASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 AC009542.2-202ENST00000619004 1067 ntBASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 MSTO2P-201ENST00000314835 1709 ntBASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 MYO15B-237ENST00000642007 4893 ntBASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 AJ011931.1-201ENST00000618749 2492 ntBASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PCDHB1Q9Y5F3 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms