Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 AC068587.6-202ENST00000641839 5619 ntBASIC15.68■□□□□ 0.1
YIPF1Q9Y548 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
YIPF1Q9Y548 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
YIPF1Q9Y548 SALL4P5-201ENST00000419001 1760 ntBASIC15.67■□□□□ 0.1
YIPF1Q9Y548 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
YIPF1Q9Y548 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
YIPF1Q9Y548 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
YIPF1Q9Y548 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
YIPF1Q9Y548 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
YIPF1Q9Y548 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
YIPF1Q9Y548 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.67■□□□□ 0.1
YIPF1Q9Y548 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
YIPF1Q9Y548 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
YIPF1Q9Y548 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
YIPF1Q9Y548 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
YIPF1Q9Y548 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.67■□□□□ 0.1
YIPF1Q9Y548 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
YIPF1Q9Y548 AL008707.1-201ENST00000422498 534 ntBASIC15.67■□□□□ 0.1
YIPF1Q9Y548 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.67■□□□□ 0.1
YIPF1Q9Y548 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC15.67■□□□□ 0.1
YIPF1Q9Y548 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
YIPF1Q9Y548 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
YIPF1Q9Y548 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
YIPF1Q9Y548 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.67■□□□□ 0.1
YIPF1Q9Y548 AC105129.2-201ENST00000559536 390 ntBASIC15.67■□□□□ 0.1
YIPF1Q9Y548 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.67■□□□□ 0.1
YIPF1Q9Y548 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.67■□□□□ 0.1
YIPF1Q9Y548 AP001505.2-201ENST00000616815 443 ntBASIC15.67■□□□□ 0.1
YIPF1Q9Y548 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
YIPF1Q9Y548 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.67■□□□□ 0.1
YIPF1Q9Y548 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
YIPF1Q9Y548 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
YIPF1Q9Y548 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.67■□□□□ 0.1
YIPF1Q9Y548 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
YIPF1Q9Y548 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
YIPF1Q9Y548 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
YIPF1Q9Y548 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
YIPF1Q9Y548 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
YIPF1Q9Y548 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
YIPF1Q9Y548 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
YIPF1Q9Y548 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.66■□□□□ 0.1
YIPF1Q9Y548 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
YIPF1Q9Y548 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.66■□□□□ 0.1
YIPF1Q9Y548 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.66■□□□□ 0.1
YIPF1Q9Y548 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
YIPF1Q9Y548 AC008741.2-201ENST00000612792 3115 ntBASIC15.66■□□□□ 0.1
YIPF1Q9Y548 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
YIPF1Q9Y548 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
YIPF1Q9Y548 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
YIPF1Q9Y548 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
YIPF1Q9Y548 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
YIPF1Q9Y548 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.66■□□□□ 0.1
YIPF1Q9Y548 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
YIPF1Q9Y548 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
YIPF1Q9Y548 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
YIPF1Q9Y548 ACTG1P2-201ENST00000415776 1125 ntBASIC15.66■□□□□ 0.1
YIPF1Q9Y548 ACTG1P11-201ENST00000425411 1125 ntBASIC15.66■□□□□ 0.1
YIPF1Q9Y548 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.66■□□□□ 0.1
YIPF1Q9Y548 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.66■□□□□ 0.1
YIPF1Q9Y548 RPL18P13-201ENST00000478088 569 ntBASIC15.66■□□□□ 0.1
YIPF1Q9Y548 RERG-205ENST00000537647 935 ntTSL 2 BASIC15.66■□□□□ 0.1
YIPF1Q9Y548 CHMP4BP1-201ENST00000556017 588 ntBASIC15.66■□□□□ 0.1
YIPF1Q9Y548 AC008825.2-201ENST00000603374 718 ntBASIC15.66■□□□□ 0.1
YIPF1Q9Y548 AC090164.2-201ENST00000611487 516 ntBASIC15.66■□□□□ 0.1
YIPF1Q9Y548 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.66■□□□□ 0.1
YIPF1Q9Y548 AC091812.3-201ENST00000621362 345 ntBASIC15.66■□□□□ 0.1
YIPF1Q9Y548 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
YIPF1Q9Y548 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
YIPF1Q9Y548 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
YIPF1Q9Y548 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
YIPF1Q9Y548 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
YIPF1Q9Y548 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.66■□□□□ 0.1
YIPF1Q9Y548 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.66■□□□□ 0.1
YIPF1Q9Y548 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
YIPF1Q9Y548 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
YIPF1Q9Y548 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC15.66■□□□□ 0.1
YIPF1Q9Y548 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
YIPF1Q9Y548 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
YIPF1Q9Y548 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
YIPF1Q9Y548 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
YIPF1Q9Y548 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
YIPF1Q9Y548 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms