Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNF11Q9Y3C5 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF11Q9Y3C5 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF11Q9Y3C5 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RNF11Q9Y3C5 AL157414.3-201ENST00000624276 1954 ntBASIC14.82□□□□□ -0.04
RNF11Q9Y3C5 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.82□□□□□ -0.04
RNF11Q9Y3C5 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF11Q9Y3C5 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.82□□□□□ -0.04
RNF11Q9Y3C5 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNF11Q9Y3C5 AC018529.2-202ENST00000611482 3087 ntBASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 BASP1P1-201ENST00000430708 665 ntBASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 FAM86LP-201ENST00000478302 853 ntBASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 AC004066.1-201ENST00000502488 802 ntBASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 AC023310.3-201ENST00000557027 670 ntBASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 AC100756.1-201ENST00000562736 682 ntBASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 RARRES2P5-201ENST00000564013 466 ntBASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 AC138749.3-201ENST00000567691 622 ntBASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 AC116165.1-201ENST00000611806 668 ntBASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.81□□□□□ -0.04
RNF11Q9Y3C5 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 MBLAC2-202ENST00000514906 1936 ntBASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 MTHFR-210ENST00000641407 2387 ntBASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 DOC2GP-202ENST00000514950 1163 ntBASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 GPALPP1-207ENST00000611650 899 ntBASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 AL360270.3-201ENST00000609118 1348 ntBASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 LILRP1-201ENST00000444199 1370 ntBASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms