Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC22.98■■□□□ 1.27
RIMBP3Q9UFD9 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC22.98■■□□□ 1.27
RIMBP3Q9UFD9 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RIMBP3Q9UFD9 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC22.98■■□□□ 1.27
RIMBP3Q9UFD9 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RIMBP3Q9UFD9 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RIMBP3Q9UFD9 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RIMBP3Q9UFD9 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RIMBP3Q9UFD9 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
RIMBP3Q9UFD9 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
RIMBP3Q9UFD9 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RIMBP3Q9UFD9 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC22.97■■□□□ 1.27
RIMBP3Q9UFD9 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RIMBP3Q9UFD9 AC131235.2-201ENST00000445553 1057 ntBASIC22.97■■□□□ 1.27
RIMBP3Q9UFD9 KRT18P62-201ENST00000446618 1287 ntBASIC22.97■■□□□ 1.27
RIMBP3Q9UFD9 AC069421.1-201ENST00000447462 323 ntBASIC22.97■■□□□ 1.27
RIMBP3Q9UFD9 PSME2P2-201ENST00000453033 700 ntBASIC22.97■■□□□ 1.27
RIMBP3Q9UFD9 TAC3-209ENST00000458521 816 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RIMBP3Q9UFD9 RN7SKP155-201ENST00000516031 288 ntBASIC22.97■■□□□ 1.27
RIMBP3Q9UFD9 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC22.97■■□□□ 1.27
RIMBP3Q9UFD9 AC134878.2-201ENST00000620700 1265 ntBASIC22.97■■□□□ 1.27
RIMBP3Q9UFD9 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RIMBP3Q9UFD9 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RIMBP3Q9UFD9 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RIMBP3Q9UFD9 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RIMBP3Q9UFD9 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC22.97■■□□□ 1.27
RIMBP3Q9UFD9 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RIMBP3Q9UFD9 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RIMBP3Q9UFD9 API5-202ENST00000420461 2009 ntTSL 2 BASIC22.97■■□□□ 1.27
RIMBP3Q9UFD9 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC22.97■■□□□ 1.27
RIMBP3Q9UFD9 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
RIMBP3Q9UFD9 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC22.97■■□□□ 1.27
RIMBP3Q9UFD9 ASS1P1-201ENST00000402854 1237 ntBASIC22.97■■□□□ 1.27
RIMBP3Q9UFD9 CA5BP1-205ENST00000435806 1064 ntBASIC22.97■■□□□ 1.27
RIMBP3Q9UFD9 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC22.97■■□□□ 1.27
RIMBP3Q9UFD9 CAP2-207ENST00000493172 861 ntTSL 2 BASIC22.97■■□□□ 1.27
RIMBP3Q9UFD9 CETN3-205ENST00000522842 664 ntTSL 2 BASIC22.97■■□□□ 1.27
RIMBP3Q9UFD9 AC145285.5-201ENST00000562217 361 ntBASIC22.97■■□□□ 1.27
RIMBP3Q9UFD9 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC22.97■■□□□ 1.27
RIMBP3Q9UFD9 PRR20FP-201ENST00000603320 180 ntBASIC22.97■■□□□ 1.27
RIMBP3Q9UFD9 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RIMBP3Q9UFD9 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RIMBP3Q9UFD9 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RIMBP3Q9UFD9 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
RIMBP3Q9UFD9 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC22.96■■□□□ 1.27
RIMBP3Q9UFD9 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RIMBP3Q9UFD9 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC22.96■■□□□ 1.27
RIMBP3Q9UFD9 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC22.96■■□□□ 1.27
RIMBP3Q9UFD9 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
RIMBP3Q9UFD9 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC22.96■■□□□ 1.27
RIMBP3Q9UFD9 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RIMBP3Q9UFD9 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC22.96■■□□□ 1.27
RIMBP3Q9UFD9 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RIMBP3Q9UFD9 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC22.96■■□□□ 1.27
RIMBP3Q9UFD9 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RIMBP3Q9UFD9 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RIMBP3Q9UFD9 HDGF-202ENST00000368206 960 ntTSL 5 BASIC22.96■■□□□ 1.27
RIMBP3Q9UFD9 SPTLC1P3-201ENST00000403408 259 ntBASIC22.96■■□□□ 1.27
RIMBP3Q9UFD9 LINC00265-2P-201ENST00000413372 782 ntBASIC22.96■■□□□ 1.27
RIMBP3Q9UFD9 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC22.96■■□□□ 1.27
RIMBP3Q9UFD9 ALDOAP1-201ENST00000491506 1078 ntBASIC22.96■■□□□ 1.27
RIMBP3Q9UFD9 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
RIMBP3Q9UFD9 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC22.96■■□□□ 1.27
RIMBP3Q9UFD9 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC22.96■■□□□ 1.27
RIMBP3Q9UFD9 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC22.96■■□□□ 1.27
RIMBP3Q9UFD9 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC22.96■■□□□ 1.27
RIMBP3Q9UFD9 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
RIMBP3Q9UFD9 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
RIMBP3Q9UFD9 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.27
RIMBP3Q9UFD9 BANP-227ENST00000626016 2144 ntTSL 2 BASIC22.95■■□□□ 1.27
RIMBP3Q9UFD9 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.27
RIMBP3Q9UFD9 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
RIMBP3Q9UFD9 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RIMBP3Q9UFD9 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
RIMBP3Q9UFD9 AL121753.2-201ENST00000624581 1461 ntBASIC22.95■■□□□ 1.26
RIMBP3Q9UFD9 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RIMBP3Q9UFD9 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RIMBP3Q9UFD9 CD3G-202ENST00000392883 1179 ntTSL 5 BASIC22.95■■□□□ 1.26
RIMBP3Q9UFD9 RPL3P2-204ENST00000413027 1203 ntBASIC22.95■■□□□ 1.26
RIMBP3Q9UFD9 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC22.95■■□□□ 1.26
RIMBP3Q9UFD9 AL136084.1-201ENST00000449172 318 ntBASIC22.95■■□□□ 1.26
RIMBP3Q9UFD9 RN7SL351P-201ENST00000469306 248 ntBASIC22.95■■□□□ 1.26
RIMBP3Q9UFD9 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RIMBP3Q9UFD9 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC22.95■■□□□ 1.26
RIMBP3Q9UFD9 AC104117.4-201ENST00000521486 847 ntBASIC22.95■■□□□ 1.26
RIMBP3Q9UFD9 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
RIMBP3Q9UFD9 KCNE3-202ENST00000525550 935 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RIMBP3Q9UFD9 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC22.95■■□□□ 1.26
RIMBP3Q9UFD9 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC22.95■■□□□ 1.26
RIMBP3Q9UFD9 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
RIMBP3Q9UFD9 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC22.95■■□□□ 1.26
RIMBP3Q9UFD9 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
RIMBP3Q9UFD9 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
RIMBP3Q9UFD9 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
RIMBP3Q9UFD9 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RIMBP3Q9UFD9 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RIMBP3Q9UFD9 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC22.94■■□□□ 1.26
RIMBP3Q9UFD9 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC22.94■■□□□ 1.26
RIMBP3Q9UFD9 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RIMBP3Q9UFD9 RPSAP12-201ENST00000435879 888 ntBASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms