Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 PCDHA5-203ENST00000614258 4248 ntBASIC12.32□□□□□ -0.44
NKX6-2Q9C056 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 AL596275.1-201ENST00000423464 877 ntBASIC12.32□□□□□ -0.44
NKX6-2Q9C056 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 AP002469.2-201ENST00000531724 424 ntBASIC12.32□□□□□ -0.44
NKX6-2Q9C056 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 AC006557.2-201ENST00000592985 1240 ntBASIC12.32□□□□□ -0.44
NKX6-2Q9C056 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 AC099336.1-202ENST00000602961 463 ntBASIC12.32□□□□□ -0.44
NKX6-2Q9C056 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 AOC4P-203ENST00000566825 2289 ntBASIC12.32□□□□□ -0.44
NKX6-2Q9C056 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 STRCP1-201ENST00000509801 5328 ntBASIC12.32□□□□□ -0.44
NKX6-2Q9C056 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX6-2Q9C056 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
NKX6-2Q9C056 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
NKX6-2Q9C056 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
NKX6-2Q9C056 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NKX6-2Q9C056 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.31□□□□□ -0.44
NKX6-2Q9C056 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NKX6-2Q9C056 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NKX6-2Q9C056 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
NKX6-2Q9C056 KRT8P22-201ENST00000562317 1415 ntBASIC12.31□□□□□ -0.44
NKX6-2Q9C056 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NKX6-2Q9C056 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.31□□□□□ -0.44
NKX6-2Q9C056 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NKX6-2Q9C056 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
NKX6-2Q9C056 FXN-203ENST00000396366 922 ntTSL 2 BASIC12.31□□□□□ -0.44
NKX6-2Q9C056 NUS1P2-201ENST00000417358 873 ntBASIC12.31□□□□□ -0.44
NKX6-2Q9C056 AC132008.2-207ENST00000454517 770 ntBASIC12.31□□□□□ -0.44
NKX6-2Q9C056 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC12.31□□□□□ -0.44
NKX6-2Q9C056 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC12.31□□□□□ -0.44
NKX6-2Q9C056 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC12.31□□□□□ -0.44
NKX6-2Q9C056 MIR4321-201ENST00000592276 80 ntBASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms