Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 TOMM22P5-201ENST00000416399 439 ntBASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 KRT18P43-201ENST00000469825 1281 ntBASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 AC140912.1-201ENST00000577171 1054 ntBASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 AC139749.1-202ENST00000617529 3139 ntBASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 AC092135.3-201ENST00000624151 1846 ntBASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 AL353779.1-201ENST00000434793 351 ntBASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 SERBP1P3-201ENST00000459980 809 ntBASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 AL512361.1-201ENST00000554200 418 ntBASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 AC044860.1-202ENST00000559481 777 ntBASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 AC055811.4-201ENST00000624039 1754 ntBASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
FOXP3Q9BZS1 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXP3Q9BZS1 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXP3Q9BZS1 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
FOXP3Q9BZS1 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXP3Q9BZS1 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXP3Q9BZS1 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXP3Q9BZS1 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
FOXP3Q9BZS1 AL359881.3-201ENST00000602640 1721 ntBASIC15.66■□□□□ 0.1
FOXP3Q9BZS1 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
FOXP3Q9BZS1 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.66■□□□□ 0.1
FOXP3Q9BZS1 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXP3Q9BZS1 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXP3Q9BZS1 SPDYE19P-201ENST00000338590 713 ntBASIC15.66■□□□□ 0.1
FOXP3Q9BZS1 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
FOXP3Q9BZS1 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.66■□□□□ 0.1
FOXP3Q9BZS1 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.66■□□□□ 0.1
FOXP3Q9BZS1 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.66■□□□□ 0.1
FOXP3Q9BZS1 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
FOXP3Q9BZS1 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.66■□□□□ 0.1
FOXP3Q9BZS1 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.66■□□□□ 0.1
FOXP3Q9BZS1 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms