Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH11XQ9BZA7 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH11XQ9BZA7 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH11XQ9BZA7 AC015909.3-201ENST00000572855 1794 ntBASIC19.32■□□□□ 0.68
PCDH11XQ9BZA7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PCDH11XQ9BZA7 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PCDH11XQ9BZA7 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH11XQ9BZA7 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDH11XQ9BZA7 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH11XQ9BZA7 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH11XQ9BZA7 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH11XQ9BZA7 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PCDH11XQ9BZA7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH11XQ9BZA7 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 WARS-232ENST00000556645 2508 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 HPGD-203ENST00000422112 805 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 PFN2-202ENST00000423691 911 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 AC023024.2-201ENST00000623561 1993 ntBASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 AC013726.1-201ENST00000563747 2285 ntBASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PCDH11XQ9BZA7 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 MBP-201ENST00000354542 575 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 RPL7P35-201ENST00000446943 740 ntBASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 AP000358.1-201ENST00000456260 156 ntBASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 NDUFS6P1-201ENST00000485187 316 ntBASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 AC026691.1-201ENST00000602502 2017 ntBASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 AC092299.1-201ENST00000632679 757 ntBASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 AC112693.3-201ENST00000624819 1983 ntBASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 TMBIM7P-202ENST00000641474 1516 ntBASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH11XQ9BZA7 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms