Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
YIPF4Q9BSR8 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 AL157414.3-201ENST00000624276 1954 ntBASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 AP005018.1-201ENST00000525475 301 ntBASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 RARRES2P5-201ENST00000564013 466 ntBASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 AC036164.1-201ENST00000570544 333 ntBASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 SAMD11P1-201ENST00000571429 661 ntBASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 AL662799.1-202ENST00000614205 422 ntBASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.33□□□□□ -0.12
YIPF4Q9BSR8 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 AL009178.2-201ENST00000597278 2719 ntBASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 KRT17P7-201ENST00000451704 1104 ntBASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 RN7SL692P-201ENST00000464677 288 ntBASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 RN7SL399P-201ENST00000471648 279 ntBASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 AL049840.4-201ENST00000602422 811 ntBASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
YIPF4Q9BSR8 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms