Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 AC092580.1-201ENST00000433998 658 ntBASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 AC012441.2-201ENST00000444843 739 ntBASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 RPS2P36-201ENST00000456516 831 ntBASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 AC008741.2-201ENST00000612792 3115 ntBASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CDK5RAP2Q96SN8 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC17.41■□□□□ 0.38
CDK5RAP2Q96SN8 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK5RAP2Q96SN8 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDK5RAP2Q96SN8 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC17.41■□□□□ 0.38
CDK5RAP2Q96SN8 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC17.41■□□□□ 0.38
CDK5RAP2Q96SN8 MIR3188-201ENST00000583494 85 ntBASIC17.41■□□□□ 0.38
CDK5RAP2Q96SN8 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC17.41■□□□□ 0.38
CDK5RAP2Q96SN8 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC17.41■□□□□ 0.38
CDK5RAP2Q96SN8 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC17.41■□□□□ 0.38
CDK5RAP2Q96SN8 MVK-217ENST00000639206 367 ntTSL 5 BASIC17.41■□□□□ 0.38
CDK5RAP2Q96SN8 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK5RAP2Q96SN8 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK5RAP2Q96SN8 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC17.41■□□□□ 0.38
CDK5RAP2Q96SN8 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDK5RAP2Q96SN8 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK5RAP2Q96SN8 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDK5RAP2Q96SN8 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK5RAP2Q96SN8 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK5RAP2Q96SN8 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDK5RAP2Q96SN8 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.41■□□□□ 0.38
CDK5RAP2Q96SN8 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK5RAP2Q96SN8 FTLP1-201ENST00000449155 526 ntBASIC17.41■□□□□ 0.38
CDK5RAP2Q96SN8 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK5RAP2Q96SN8 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC17.41■□□□□ 0.38
CDK5RAP2Q96SN8 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK5RAP2Q96SN8 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CDK5RAP2Q96SN8 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.41■□□□□ 0.38
CDK5RAP2Q96SN8 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC17.41■□□□□ 0.38
CDK5RAP2Q96SN8 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDK5RAP2Q96SN8 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK5RAP2Q96SN8 AL354702.1-201ENST00000442006 1960 ntBASIC17.41■□□□□ 0.38
CDK5RAP2Q96SN8 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK5RAP2Q96SN8 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDK5RAP2Q96SN8 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP2Q96SN8 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP2Q96SN8 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CDK5RAP2Q96SN8 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CDK5RAP2Q96SN8 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP2Q96SN8 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP2Q96SN8 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP2Q96SN8 JTB-202ENST00000356648 1040 ntTSL 2 BASIC17.4■□□□□ 0.38
CDK5RAP2Q96SN8 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP2Q96SN8 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP2Q96SN8 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP2Q96SN8 MIR33B-201ENST00000385104 96 ntBASIC17.4■□□□□ 0.38
CDK5RAP2Q96SN8 HNRNPA1P27-201ENST00000412087 955 ntBASIC17.4■□□□□ 0.38
CDK5RAP2Q96SN8 AC011742.3-201ENST00000439053 820 ntBASIC17.4■□□□□ 0.38
CDK5RAP2Q96SN8 SUPT4H1P2-201ENST00000501248 353 ntBASIC17.4■□□□□ 0.38
CDK5RAP2Q96SN8 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC17.4■□□□□ 0.38
CDK5RAP2Q96SN8 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC17.4■□□□□ 0.38
CDK5RAP2Q96SN8 HPN-206ENST00000597419 1212 ntTSL 5 BASIC17.4■□□□□ 0.38
CDK5RAP2Q96SN8 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC17.4■□□□□ 0.38
CDK5RAP2Q96SN8 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP2Q96SN8 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms