Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC85AQ96PX6 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC85AQ96PX6 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC85AQ96PX6 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC85AQ96PX6 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC85AQ96PX6 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC85AQ96PX6 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC85AQ96PX6 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC85AQ96PX6 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CCDC85AQ96PX6 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC85AQ96PX6 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC85AQ96PX6 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC85AQ96PX6 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CCDC85AQ96PX6 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC85AQ96PX6 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC85AQ96PX6 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CCDC85AQ96PX6 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC85AQ96PX6 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC85AQ96PX6 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CCDC85AQ96PX6 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC85AQ96PX6 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC85AQ96PX6 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC85AQ96PX6 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CCDC85AQ96PX6 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
CCDC85AQ96PX6 DEF8-202ENST00000418391 852 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC85AQ96PX6 EIF4HP1-201ENST00000453115 687 ntBASIC18.71■□□□□ 0.59
CCDC85AQ96PX6 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC85AQ96PX6 AC021723.1-201ENST00000486306 515 ntBASIC18.71■□□□□ 0.59
CCDC85AQ96PX6 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC18.71■□□□□ 0.59
CCDC85AQ96PX6 MIR4783-201ENST00000580343 82 ntBASIC18.71■□□□□ 0.59
CCDC85AQ96PX6 AL136301.1-201ENST00000615830 422 ntBASIC18.71■□□□□ 0.59
CCDC85AQ96PX6 AL603764.1-201ENST00000636452 321 ntBASIC18.71■□□□□ 0.59
CCDC85AQ96PX6 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CCDC85AQ96PX6 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC85AQ96PX6 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC85AQ96PX6 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC85AQ96PX6 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC85AQ96PX6 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC85AQ96PX6 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC85AQ96PX6 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CCDC85AQ96PX6 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC85AQ96PX6 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC85AQ96PX6 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC85AQ96PX6 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.58
CCDC85AQ96PX6 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC85AQ96PX6 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC85AQ96PX6 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC85AQ96PX6 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC85AQ96PX6 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC85AQ96PX6 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC85AQ96PX6 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CCDC85AQ96PX6 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC85AQ96PX6 RN7SKP175-201ENST00000408472 289 ntBASIC18.7■□□□□ 0.58
CCDC85AQ96PX6 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC85AQ96PX6 AL354877.1-201ENST00000424412 413 ntBASIC18.7■□□□□ 0.58
CCDC85AQ96PX6 AC016700.1-201ENST00000429424 312 ntBASIC18.7■□□□□ 0.58
CCDC85AQ96PX6 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC85AQ96PX6 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC18.7■□□□□ 0.58
CCDC85AQ96PX6 SERPINA13P-202ENST00000478994 924 ntBASIC18.7■□□□□ 0.58
CCDC85AQ96PX6 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
CCDC85AQ96PX6 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC85AQ96PX6 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC85AQ96PX6 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC85AQ96PX6 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC85AQ96PX6 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC85AQ96PX6 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC85AQ96PX6 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC18.7■□□□□ 0.58
CCDC85AQ96PX6 AC002472.3-201ENST00000640124 621 ntBASIC18.7■□□□□ 0.58
CCDC85AQ96PX6 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC85AQ96PX6 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC85AQ96PX6 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CCDC85AQ96PX6 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC85AQ96PX6 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC85AQ96PX6 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC85AQ96PX6 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC85AQ96PX6 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC85AQ96PX6 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CCDC85AQ96PX6 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CCDC85AQ96PX6 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC85AQ96PX6 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 LILRP1-201ENST00000444199 1370 ntBASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 E2F3P2-201ENST00000447755 1422 ntBASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms