Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.32□□□□□ -0.28
SPTSSAQ969W0 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.32□□□□□ -0.28
SPTSSAQ969W0 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
SPTSSAQ969W0 AC099568.2-201ENST00000609194 695 ntBASIC13.32□□□□□ -0.28
SPTSSAQ969W0 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SPTSSAQ969W0 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SPTSSAQ969W0 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SPTSSAQ969W0 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SPTSSAQ969W0 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SPTSSAQ969W0 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.32□□□□□ -0.28
SPTSSAQ969W0 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SPTSSAQ969W0 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.32□□□□□ -0.28
SPTSSAQ969W0 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SPTSSAQ969W0 AC093525.8-201ENST00000624099 1342 ntBASIC13.32□□□□□ -0.28
SPTSSAQ969W0 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.32□□□□□ -0.28
SPTSSAQ969W0 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SPTSSAQ969W0 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SPTSSAQ969W0 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.32□□□□□ -0.28
SPTSSAQ969W0 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.32□□□□□ -0.28
SPTSSAQ969W0 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SPTSSAQ969W0 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SPTSSAQ969W0 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SPTSSAQ969W0 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 ST20-AS1-201ENST00000560255 4223 ntBASIC13.31□□□□□ -0.28
SPTSSAQ969W0 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 AC134915.1-201ENST00000426461 574 ntBASIC13.31□□□□□ -0.28
SPTSSAQ969W0 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 AC232323.1-201ENST00000540724 2099 ntBASIC13.31□□□□□ -0.28
SPTSSAQ969W0 REXO1L5P-201ENST00000622260 2098 ntBASIC13.31□□□□□ -0.28
SPTSSAQ969W0 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 AL158070.2-201ENST00000623713 1621 ntBASIC13.31□□□□□ -0.28
SPTSSAQ969W0 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPTSSAQ969W0 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SPTSSAQ969W0 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SPTSSAQ969W0 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SPTSSAQ969W0 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SPTSSAQ969W0 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.3□□□□□ -0.28
SPTSSAQ969W0 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SPTSSAQ969W0 INTS4P2-202ENST00000614726 2019 ntBASIC13.3□□□□□ -0.28
SPTSSAQ969W0 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SPTSSAQ969W0 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SPTSSAQ969W0 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SPTSSAQ969W0 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SPTSSAQ969W0 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SPTSSAQ969W0 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SPTSSAQ969W0 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
SPTSSAQ969W0 CICP14-201ENST00000629111 2732 ntBASIC13.3□□□□□ -0.28
SPTSSAQ969W0 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.3□□□□□ -0.28
SPTSSAQ969W0 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SPTSSAQ969W0 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SPTSSAQ969W0 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SPTSSAQ969W0 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.3□□□□□ -0.28
SPTSSAQ969W0 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SPTSSAQ969W0 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SPTSSAQ969W0 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SPTSSAQ969W0 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SPTSSAQ969W0 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SPTSSAQ969W0 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SPTSSAQ969W0 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.3□□□□□ -0.28
SPTSSAQ969W0 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.3□□□□□ -0.28
SPTSSAQ969W0 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.3□□□□□ -0.28
SPTSSAQ969W0 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.3□□□□□ -0.28
SPTSSAQ969W0 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 279.2 ms