Protein–RNA interactions for Protein: Q8N4S0

CCDC82, Coiled-coil domain-containing protein 82, humanhuman

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC82Q8N4S0 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 NUS1P3-201ENST00000423502 862 ntBASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 AC012441.1-201ENST00000446669 685 ntBASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 AC114812.1-204ENST00000449669 728 ntBASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 AC022137.2-201ENST00000503482 481 ntBASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 USP32P1-208ENST00000506594 1164 ntBASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 AP001889.1-201ENST00000525414 633 ntBASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 AC103702.1-201ENST00000548801 2630 ntBASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 AC106881.1-201ENST00000605849 3329 ntBASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 KRT8P35-201ENST00000483942 1338 ntBASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CCDC82Q8N4S0 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 LRRC59-203ENST00000576448 1531 ntBASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 AC015656.1-201ENST00000624209 3578 ntBASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 AL645937.2-201ENST00000396808 931 ntBASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 KRT18P25-201ENST00000508931 1278 ntBASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 AC145423.3-201ENST00000615987 467 ntBASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 AC063926.2-201ENST00000623766 1308 ntBASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC82Q8N4S0 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC82Q8N4S0 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC82Q8N4S0 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
CCDC82Q8N4S0 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC82Q8N4S0 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.67■□□□□ 0.42
CCDC82Q8N4S0 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC82Q8N4S0 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CCDC82Q8N4S0 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC82Q8N4S0 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC82Q8N4S0 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CCDC82Q8N4S0 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC82Q8N4S0 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC82Q8N4S0 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CCDC82Q8N4S0 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC82Q8N4S0 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CCDC82Q8N4S0 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms