Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.2
COL27A1Q8IZC6 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL27A1Q8IZC6 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL27A1Q8IZC6 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
COL27A1Q8IZC6 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL27A1Q8IZC6 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
COL27A1Q8IZC6 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL27A1Q8IZC6 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.83□□□□□ -0.2
COL27A1Q8IZC6 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
COL27A1Q8IZC6 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC13.83□□□□□ -0.2
COL27A1Q8IZC6 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 AC138466.5-201ENST00000624002 808 ntBASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 LINC00528-201ENST00000600723 2160 ntBASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 DPY19L2P5-201ENST00000456300 331 ntBASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 RNA5SP417-201ENST00000516459 108 ntBASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 AL022344.2-201ENST00000568976 968 ntBASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.82□□□□□ -0.2
COL27A1Q8IZC6 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.81□□□□□ -0.2
COL27A1Q8IZC6 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL27A1Q8IZC6 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL27A1Q8IZC6 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL27A1Q8IZC6 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
COL27A1Q8IZC6 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL27A1Q8IZC6 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL27A1Q8IZC6 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
COL27A1Q8IZC6 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL27A1Q8IZC6 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COL27A1Q8IZC6 AL354861.1-201ENST00000445213 355 ntBASIC13.81□□□□□ -0.2
COL27A1Q8IZC6 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COL27A1Q8IZC6 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC13.81□□□□□ -0.2
COL27A1Q8IZC6 MT3-203ENST00000565838 421 ntTSL 3 BASIC13.81□□□□□ -0.2
COL27A1Q8IZC6 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COL27A1Q8IZC6 AC090386.2-201ENST00000623010 1039 ntBASIC13.81□□□□□ -0.2
COL27A1Q8IZC6 AP001184.1-201ENST00000637936 376 ntBASIC13.81□□□□□ -0.2
COL27A1Q8IZC6 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
COL27A1Q8IZC6 AL136172.1-201ENST00000598590 1394 ntBASIC13.81□□□□□ -0.2
COL27A1Q8IZC6 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COL27A1Q8IZC6 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL27A1Q8IZC6 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.81□□□□□ -0.2
COL27A1Q8IZC6 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.81□□□□□ -0.2
COL27A1Q8IZC6 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COL27A1Q8IZC6 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.81□□□□□ -0.2
COL27A1Q8IZC6 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.81□□□□□ -0.2
COL27A1Q8IZC6 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 KRT17P5-201ENST00000332088 839 ntBASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 AC234644.1-201ENST00000406065 370 ntBASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 STK16-203ENST00000409516 895 ntTSL 2 BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 SCARNA12-201ENST00000459155 270 ntBASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 AC138701.2-201ENST00000553634 226 ntBASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms