Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC83Q8IWF9 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CCDC83Q8IWF9 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC83Q8IWF9 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC83Q8IWF9 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC17.83■□□□□ 0.44
CCDC83Q8IWF9 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC83Q8IWF9 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC83Q8IWF9 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC83Q8IWF9 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC83Q8IWF9 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
CCDC83Q8IWF9 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CCDC83Q8IWF9 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC83Q8IWF9 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC83Q8IWF9 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC83Q8IWF9 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC83Q8IWF9 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CCDC83Q8IWF9 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC83Q8IWF9 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC83Q8IWF9 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC83Q8IWF9 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CCDC83Q8IWF9 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
CCDC83Q8IWF9 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC83Q8IWF9 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CCDC83Q8IWF9 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC83Q8IWF9 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CCDC83Q8IWF9 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC83Q8IWF9 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC83Q8IWF9 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC83Q8IWF9 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC83Q8IWF9 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC83Q8IWF9 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.82■□□□□ 0.44
CCDC83Q8IWF9 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC83Q8IWF9 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC83Q8IWF9 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC83Q8IWF9 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC83Q8IWF9 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC83Q8IWF9 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC83Q8IWF9 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC83Q8IWF9 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC83Q8IWF9 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC83Q8IWF9 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC83Q8IWF9 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CCDC83Q8IWF9 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CCDC83Q8IWF9 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC83Q8IWF9 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC83Q8IWF9 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
CCDC83Q8IWF9 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC83Q8IWF9 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC83Q8IWF9 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC83Q8IWF9 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC83Q8IWF9 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC83Q8IWF9 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC83Q8IWF9 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC83Q8IWF9 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.81■□□□□ 0.44
CCDC83Q8IWF9 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.81■□□□□ 0.44
CCDC83Q8IWF9 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC83Q8IWF9 MIR8072-201ENST00000614241 80 ntBASIC17.81■□□□□ 0.44
CCDC83Q8IWF9 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC83Q8IWF9 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC83Q8IWF9 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC83Q8IWF9 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.81■□□□□ 0.44
CCDC83Q8IWF9 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CCDC83Q8IWF9 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC83Q8IWF9 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CCDC83Q8IWF9 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC83Q8IWF9 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC83Q8IWF9 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC83Q8IWF9 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC83Q8IWF9 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC83Q8IWF9 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CCDC83Q8IWF9 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 BASP1P1-201ENST00000430708 665 ntBASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 651.1 ms