Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC15.4■□□□□ 0.06
PACS2Q86VP3 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PACS2Q86VP3 AC068137.2-201ENST00000605408 478 ntBASIC15.4■□□□□ 0.06
PACS2Q86VP3 GPALPP1-207ENST00000611650 899 ntBASIC15.4■□□□□ 0.06
PACS2Q86VP3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PACS2Q86VP3 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PACS2Q86VP3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
PACS2Q86VP3 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PACS2Q86VP3 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PACS2Q86VP3 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PACS2Q86VP3 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PACS2Q86VP3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.4■□□□□ 0.06
PACS2Q86VP3 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PACS2Q86VP3 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PACS2Q86VP3 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PACS2Q86VP3 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PACS2Q86VP3 AC007326.2-201ENST00000624224 7579 ntBASIC15.4■□□□□ 0.06
PACS2Q86VP3 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PACS2Q86VP3 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PACS2Q86VP3 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC15.4■□□□□ 0.06
PACS2Q86VP3 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PACS2Q86VP3 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.39■□□□□ 0.05
PACS2Q86VP3 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.39■□□□□ 0.05
PACS2Q86VP3 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PACS2Q86VP3 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PACS2Q86VP3 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PACS2Q86VP3 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PACS2Q86VP3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PACS2Q86VP3 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PACS2Q86VP3 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PACS2Q86VP3 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.39■□□□□ 0.05
PACS2Q86VP3 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.39■□□□□ 0.05
PACS2Q86VP3 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PACS2Q86VP3 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PACS2Q86VP3 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PACS2Q86VP3 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PACS2Q86VP3 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PACS2Q86VP3 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PACS2Q86VP3 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PACS2Q86VP3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PACS2Q86VP3 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
PACS2Q86VP3 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PACS2Q86VP3 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.39■□□□□ 0.05
PACS2Q86VP3 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.39■□□□□ 0.05
PACS2Q86VP3 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.39■□□□□ 0.05
PACS2Q86VP3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.39■□□□□ 0.05
PACS2Q86VP3 AL049829.1-201ENST00000465411 156 ntBASIC15.39■□□□□ 0.05
PACS2Q86VP3 AC112482.1-201ENST00000492080 688 ntBASIC15.39■□□□□ 0.05
PACS2Q86VP3 AC104629.1-201ENST00000494226 508 ntBASIC15.39■□□□□ 0.05
PACS2Q86VP3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.39■□□□□ 0.05
PACS2Q86VP3 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
PACS2Q86VP3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
PACS2Q86VP3 AC087641.1-201ENST00000557561 1021 ntBASIC15.39■□□□□ 0.05
PACS2Q86VP3 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.39■□□□□ 0.05
PACS2Q86VP3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
PACS2Q86VP3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.39■□□□□ 0.05
PACS2Q86VP3 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PACS2Q86VP3 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PACS2Q86VP3 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
PACS2Q86VP3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PACS2Q86VP3 DKFZP434A062-201ENST00000573103 5021 ntBASIC15.39■□□□□ 0.05
PACS2Q86VP3 AC131009.4-201ENST00000624048 1740 ntBASIC15.39■□□□□ 0.05
PACS2Q86VP3 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PACS2Q86VP3 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
PACS2Q86VP3 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.39■□□□□ 0.05
PACS2Q86VP3 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC15.39■□□□□ 0.05
PACS2Q86VP3 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PACS2Q86VP3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PACS2Q86VP3 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PACS2Q86VP3 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
PACS2Q86VP3 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PACS2Q86VP3 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PACS2Q86VP3 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PACS2Q86VP3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.38■□□□□ 0.05
PACS2Q86VP3 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PACS2Q86VP3 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.38■□□□□ 0.05
PACS2Q86VP3 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PACS2Q86VP3 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
PACS2Q86VP3 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PACS2Q86VP3 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PACS2Q86VP3 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.38■□□□□ 0.05
PACS2Q86VP3 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC15.38■□□□□ 0.05
PACS2Q86VP3 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PACS2Q86VP3 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC15.38■□□□□ 0.05
PACS2Q86VP3 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.38■□□□□ 0.05
PACS2Q86VP3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.38■□□□□ 0.05
PACS2Q86VP3 MKNK2P1-201ENST00000437526 628 ntBASIC15.38■□□□□ 0.05
PACS2Q86VP3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.38■□□□□ 0.05
PACS2Q86VP3 AC026616.1-201ENST00000523157 525 ntBASIC15.38■□□□□ 0.05
PACS2Q86VP3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.38■□□□□ 0.05
PACS2Q86VP3 AC112191.1-201ENST00000523689 701 ntBASIC15.38■□□□□ 0.05
PACS2Q86VP3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PACS2Q86VP3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.38■□□□□ 0.05
PACS2Q86VP3 AC007216.2-201ENST00000562802 384 ntTSL 3 BASIC15.38■□□□□ 0.05
PACS2Q86VP3 MPDU1-223ENST00000582151 728 ntBASIC15.38■□□□□ 0.05
PACS2Q86VP3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.38■□□□□ 0.05
PACS2Q86VP3 AC006538.3-201ENST00000612495 578 ntBASIC15.38■□□□□ 0.05
PACS2Q86VP3 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
PACS2Q86VP3 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
PACS2Q86VP3 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms