Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
SHFQ7M4L6 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SHFQ7M4L6 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.77□□□□□ -0.21
SHFQ7M4L6 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SHFQ7M4L6 AL589739.1-201ENST00000607720 493 ntBASIC13.77□□□□□ -0.21
SHFQ7M4L6 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.77□□□□□ -0.21
SHFQ7M4L6 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.77□□□□□ -0.21
SHFQ7M4L6 MIR6080-201ENST00000617359 66 ntBASIC13.77□□□□□ -0.21
SHFQ7M4L6 AP001059.3-201ENST00000619053 235 ntBASIC13.77□□□□□ -0.21
SHFQ7M4L6 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SHFQ7M4L6 AC107918.4-201ENST00000641966 3141 ntBASIC13.77□□□□□ -0.21
SHFQ7M4L6 CETN4P-206ENST00000642099 2168 ntBASIC13.77□□□□□ -0.21
SHFQ7M4L6 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SHFQ7M4L6 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SHFQ7M4L6 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SHFQ7M4L6 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
SHFQ7M4L6 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SHFQ7M4L6 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.77□□□□□ -0.21
SHFQ7M4L6 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
SHFQ7M4L6 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SHFQ7M4L6 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.76□□□□□ -0.21
SHFQ7M4L6 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.76□□□□□ -0.21
SHFQ7M4L6 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SHFQ7M4L6 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.76□□□□□ -0.21
SHFQ7M4L6 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.76□□□□□ -0.21
SHFQ7M4L6 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
SHFQ7M4L6 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.76□□□□□ -0.21
SHFQ7M4L6 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.76□□□□□ -0.21
SHFQ7M4L6 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.76□□□□□ -0.21
SHFQ7M4L6 AC012508.2-201ENST00000567613 1472 ntBASIC13.76□□□□□ -0.21
SHFQ7M4L6 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.76□□□□□ -0.21
SHFQ7M4L6 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SHFQ7M4L6 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
SHFQ7M4L6 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.76□□□□□ -0.21
SHFQ7M4L6 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.76□□□□□ -0.21
SHFQ7M4L6 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.76□□□□□ -0.21
SHFQ7M4L6 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.76□□□□□ -0.21
SHFQ7M4L6 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.76□□□□□ -0.21
SHFQ7M4L6 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 AC015910.1-201ENST00000579400 975 ntBASIC13.76□□□□□ -0.21
SHFQ7M4L6 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.76□□□□□ -0.21
SHFQ7M4L6 MIR4453-201ENST00000584019 89 ntBASIC13.76□□□□□ -0.21
SHFQ7M4L6 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.76□□□□□ -0.21
SHFQ7M4L6 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.76□□□□□ -0.21
SHFQ7M4L6 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.76□□□□□ -0.21
SHFQ7M4L6 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 AC005252.3-201ENST00000623855 2258 ntBASIC13.76□□□□□ -0.21
SHFQ7M4L6 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.76□□□□□ -0.21
SHFQ7M4L6 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.76□□□□□ -0.21
SHFQ7M4L6 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.76□□□□□ -0.21
SHFQ7M4L6 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.76□□□□□ -0.21
SHFQ7M4L6 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHFQ7M4L6 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.75□□□□□ -0.21
SHFQ7M4L6 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.75□□□□□ -0.21
SHFQ7M4L6 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHFQ7M4L6 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
SHFQ7M4L6 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
SHFQ7M4L6 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.75□□□□□ -0.21
SHFQ7M4L6 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SHFQ7M4L6 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SHFQ7M4L6 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHFQ7M4L6 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SHFQ7M4L6 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SHFQ7M4L6 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms