Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 AC026434.2-201ENST00000506094 1078 ntBASIC16.35■□□□□ 0.21
KRT39Q6A163 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.35■□□□□ 0.21
KRT39Q6A163 AC068587.3-201ENST00000526613 355 ntBASIC16.35■□□□□ 0.21
KRT39Q6A163 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
KRT39Q6A163 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
KRT39Q6A163 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.35■□□□□ 0.21
KRT39Q6A163 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.35■□□□□ 0.21
KRT39Q6A163 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
KRT39Q6A163 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
KRT39Q6A163 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT39Q6A163 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KRT39Q6A163 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KRT39Q6A163 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
KRT39Q6A163 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT39Q6A163 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
KRT39Q6A163 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
KRT39Q6A163 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
KRT39Q6A163 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT39Q6A163 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.35■□□□□ 0.21
KRT39Q6A163 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT39Q6A163 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT39Q6A163 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT39Q6A163 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT39Q6A163 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT39Q6A163 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
KRT39Q6A163 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
KRT39Q6A163 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
KRT39Q6A163 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
KRT39Q6A163 MIR600HG-201ENST00000449175 5984 ntBASIC16.34■□□□□ 0.21
KRT39Q6A163 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
KRT39Q6A163 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT39Q6A163 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT39Q6A163 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
KRT39Q6A163 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.34■□□□□ 0.21
KRT39Q6A163 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT39Q6A163 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.34■□□□□ 0.21
KRT39Q6A163 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
KRT39Q6A163 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT39Q6A163 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
KRT39Q6A163 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT39Q6A163 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.34■□□□□ 0.21
KRT39Q6A163 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.34■□□□□ 0.21
KRT39Q6A163 AC007389.4-201ENST00000454674 793 ntBASIC16.34■□□□□ 0.21
KRT39Q6A163 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.34■□□□□ 0.21
KRT39Q6A163 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.34■□□□□ 0.21
KRT39Q6A163 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.34■□□□□ 0.21
KRT39Q6A163 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
KRT39Q6A163 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
KRT39Q6A163 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
KRT39Q6A163 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT39Q6A163 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.34■□□□□ 0.21
KRT39Q6A163 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT39Q6A163 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT39Q6A163 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT39Q6A163 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT39Q6A163 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT39Q6A163 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT39Q6A163 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
KRT39Q6A163 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT39Q6A163 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT39Q6A163 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT39Q6A163 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT39Q6A163 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
KRT39Q6A163 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
KRT39Q6A163 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
KRT39Q6A163 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
KRT39Q6A163 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
KRT39Q6A163 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
KRT39Q6A163 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
KRT39Q6A163 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
KRT39Q6A163 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.33■□□□□ 0.21
KRT39Q6A163 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.33■□□□□ 0.21
KRT39Q6A163 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
KRT39Q6A163 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
KRT39Q6A163 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT39Q6A163 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT39Q6A163 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT39Q6A163 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KRT39Q6A163 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT39Q6A163 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT39Q6A163 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT39Q6A163 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT39Q6A163 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
KRT39Q6A163 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
KRT39Q6A163 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.33■□□□□ 0.2
KRT39Q6A163 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.33■□□□□ 0.2
KRT39Q6A163 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.33■□□□□ 0.2
KRT39Q6A163 INE1-201ENST00000456273 945 ntBASIC16.33■□□□□ 0.2
KRT39Q6A163 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.33■□□□□ 0.2
KRT39Q6A163 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.33■□□□□ 0.2
KRT39Q6A163 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.33■□□□□ 0.2
KRT39Q6A163 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT39Q6A163 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.33■□□□□ 0.2
KRT39Q6A163 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT39Q6A163 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KRT39Q6A163 AC018665.1-201ENST00000622927 1362 ntBASIC16.33■□□□□ 0.2
KRT39Q6A163 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT39Q6A163 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT39Q6A163 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
KRT39Q6A163 CU639417.3-201ENST00000624240 1404 ntBASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms